Publications

See also the MBLWHOI Library Publications List

2014

Algar, CK; Vallino, JJ. 2014. Predicting Microbial Nitrate Reduction Pathways in Coastal Sediments. Aquatic Microbial Ecology 71:223-238, doi: 10.3354/ame01678.

Schmitz, OJ; Raymond, PA; Estes, JA; Kurz, WA; Holtgrieve, GW; Ritchie, ME; Schindler, DE; Spivak, AC; Wilson, RW; Bradford, MA; Christensen, V; Deegan, L; Smetacek, V; Vanni, MJ; Wilmers, CC. 2014. Animating the Carbon Cycle. Ecosystems 1-16, doi: 10.1007/s10021-013-9715-7.

Sistla, SA; Rastetter, EB; Schimel, JP. 2014. Responses of a tundra system to warming using SCAMPS: a stoichiometrically coupled, acclimating microbe-plant-soil model. Ecological Monographs 84(1): 151-170, doi: 10.1890/12-2119.1.

Soares, LSH; Muto, EY; Lopez, JP; Clauzet, GRV; Valiela, I. 2014. Seasonal variability of 13C and 15N of fish and squid in the Cabo Frio upwelling system of the southwestern Atlantic. Marine Ecology Progress Series 512:9-21, doi: 10.3354/meps10948

Souther, S; Fetcher, N; Folwer, Z; Shaver, GR; McGraw, JB. 2014. Ecotypic differentiation in photosynthesis and growth of Eriophorum vaginatum along a latitudnal gradient in the arctic tundra. Botany-Botanique 92(8): 551-561, doi: 10.1139/cjb-2013-0320.

Tang, J; Luyssaert, S; Richardson, AD; Kutsch, W; Janssens, IA. 2014. Steeper declines in forest photosynthesis than respiration explain age-driven decreases in forest growth. Proceedings of the National Academy of Sciences of the United States of America, doi: 10.1073/pnas.1320761111.

Thomas, F; Giblin, AE; Cardon, ZG; Sievert, SM. 2014. Rhizosphere heterogeneity shapes abundance and activity of sulfur-oxidizing bacteria in vegetated salt marsh sediments. Frontiers in Microbiology 5:309, doi: 10.3389/fmicb.2014.00309.

Valiela, I; Bartholomew, M; Giblin, A; Tucker, J; Harris, C; Martinetto, P; Otter, M; Camilli, L; Stone, T. 2014. Watershed Deforestation and Down-Estuary Transformations Alter Sources, Transport, and Export of Suspended Particles in Panamanian Mangrove Estuaries. Ecosystems 17(1): 96-111, doi: 10.1007/s10021-013-9709-5.

Wang, X; Liu, L; Piao, S; Janssens, IA; Tang, J; Liu, W; Chi, Y; Wang, J; Xu, S. 2014. Soil respiration under climate warming: differential response of heterotrophic and autotrophic respiration. Global Change Biology 20(10): 3229-3237, doi: 10.111/gcb.12620.

Williams, M; Rastetter, EB; Van der Pol, L; Shaver, GR. 2014. Arctic canopy photosynthetic efficiency enhanced under diffuse light, linked to a reduction in the fraction of the canopy in deep shade. New Phytologist 202(4): 1266-1276, doi: 10.1111/nph.12750.

Wilson, N; Mozzherin, D; Lans, K; Leary, P; Rice, J; Walley, L; Parr, C; Schulz, K; Hammock, J; Goddard, A. Corrigan, R. 2014. TraitBank: Structured Biodiversity Data from the Encyclopedia of Life. Royal Society of London Conference Poster, doi: 10.6084/m9.figshare.1011835.

Wollheim, WM; Harmes, TK; Peterson, BJ; Morkeski, K; Hopkinson, CS; Stewart, RJ; Goosefff, MN; Briggs, MA. 2014. Nitrate uptake dynamics of surface transient storage in stream channels and fluvial wetlands. Biogeochemistry 120(1-3): 239-257, doi: 10.1007/s10533-014-9993-y.

Xu, H; Twine, TE; Yang, X. 2014. Evaluating Remotely Sensed Phenological Metrics in a Dynamic Ecosystem Model. Remote Sensing 6(6): 4660-4686, doi: 10.3390/rs6064660.

Yang, X; Tang, J; Mustard, J. 2014. Beyond leaf color: comparing camera-based phenological metrics with leaf biochemical, biophysical and spectral properties throughout the growing season of a temperate deciduous forest. Journal of Geophysical Research: Biogeosciences, doi: 10.1002/2013JG002460.

Zheng, H; Huang, H; Yao, L.; Liu, J; He, H; Tang, J. 2014. Impacts of rice varieties and management on yield-scaled greenhouse gas emissions from rice fields in China: A meta-analysis. Biogeosciences 11(13): 3685-3693, doi: 10.5194/bg-11-3685-2014.

Zhu, X; Zhuang, Q; Lu, X; Song, L. 2014. Spatial scale-dependent land-atmospheric methane exchanges in the northern high latitudes from 1993 to 2004. Biogeosciences 11(7):1693-1704, doi: 10.5194/bg-11-1693-2014.

2013

Berg, P; Long, MH; Huettel, M; Rheuban, JE; McGlathery, KJ; Howarth, RW; Foreman, KH; Giblin, AE; Marino, R. 2013. Eddy Correlation Measurements of Oxygen Fluxes in Permeable Sediments Exposed to Varying Current Flow and Light. Limnology and Oceanography 58(4): 1329-1343, doi: 10.4319/lo.2013.58.4.1329.

Bret-Harte, MS; Mack, MC; Shaver, GR; Huebner, DC; Johnston, M; Mojica, CA; Pizano, C; Reiskind, JA. 2013. The Response of Arctic Vegetation and Soils Following an Unusually Severe Tundra Fire. Philosophical Transactions of the Royal Society B-Biological Sciences 368(1624): 15, doi: 10.1098/rstb.2012.0490.

Cardon, ZG; Stark, JM; Herron, PM; Rasmussen, JA. 2013. Sagebrush Carrying Out Hydraulic Lift Enhances Surface Soil Nitrogen Cycling and Nitrogen Uptake into Inflorescences. Proceedings of the National Academy of Sciences of the United States of America 110(47): 18988-18993, doi: 10.1073/pnas.1311314110.

Chuang, CY; Santschi, PH; Ho, YF; Conte, MH; Guo, LD; Schumann, D; Ayranov, M; Li, YH. 2013. Role of Biopolymers as Major Carrier Phases of Th, Pa, Pb, Po, and Be Radionuclides in Settling Particles from the Atlantic Ocean. Marine Chemistry 157: 131-143, doi: 10.1016/j.marchem.2013.10.002.

Ducklow, HW; Doney, SC. 2013. What is the Metabolic State of the Oligotrophic Ocean? A Debate. Annual Review of Marine Science 5(1): 525-533, doi: 10.1146/annurev-marine-121211-172331.

Ducklow, HW; Fraser, WR; Meredith, MP; Stammerjohn, SE; Doney, SC; Martinson, DG; Sailley, SF; Schofield, OM; Steinberg, DK; Venables, HJ; Amsler, CD. 2013. West Antarctic Peninsula: An Ice-dependent Coastal Marine Ecosystem in Transition. Oceanography 26(3): 190-203.

Eby, M; Weaver, AJ; Alexander, K; Zickfeld, K; Abe-Ouchi, A; Cimatoribus, AA; Crespin, E; Drijfhout, SS; Edwards, NR; Eliseev, AV; Feulner, G; Fichefet, T; Forest, CE; Goosse, H; Holden, PB; Joos, F; Kawamiya, M; Kicklighter, D; Kienert, H; Matsumoto, K; Mokhov, II; Monier, E; Olsen, SM; Pedersen, JOP; Perrette, M; Philippon-Berthier, G; Ridgwell, A; Schlosser, A; Schneider von Deimling, T; Shaffer, G; Smith, RS; Spahni, R; Sokolov, AP; Steinacher, M; Tachiiri, K; Tokos, K; Yoshimori, M; Zeng, N; Zhao, F. 2013. Historical and Idealized Climate Model Experiments: An Intercomparison of Earth System Models of Intermediate Complexity. Climate of the Past 9(3): 1111-1140, doi: 10.5194/cp-9-1111-2013.

Fagherazzi, S; FitzGerald, DM; Fulweiler, RW; Hughes, Z; Wiberg, PL; McGlathery, KJ; Morris, JT; Tolhurst, TJ; Deegan, LA; Johnson, DS. 2013. Ecogeomorphology of Salt Marshes. In: Treatise on Geomorphology, Vol. 12, pp. 182-200. JF Shroder, ed. Academic Press, San Diego, doi: http://dx.doi.org/10.1016/B978-0-12-374739-6.00329-8.

Fagherazzi, S; FitzGerald, DM; Fulweiler, RW; Hughes, Z; Wiberg, PL; McGlathery, KJ; Morris, JT; Tolhurst, TJ; Deegan, LA; Johnson, DS. 2013. Ecogeomorphology of Tidal Flats. In: Treatise on Geomorphology, Vol. 12, pp. 201-220. JF Shroder, ed. Academic Press, San Diego, doi: http://dx.doi.org/10.1016/B978-0-12-374739-6.00329-8.

Frey, SD; Lee, J; Melillo, J; Six, JW. 2013. The Temperature Response of Soil Microbial Efficiency and its Feedback to Climate. Nature Climate Change 3: 395-398.

Gao, X; Schlosser, CA; Sokolov, A; Anthony, KW; Zhuang, QL; Kicklighter, D. 2013. Permafrost Degradation and Methane: Low Risk of Biogeochemical Climate-warming Feedback. Environmental Research Letters 8(3): 7, doi: 10.1088/1748-9326/8/3/035014.

Garzio, LM; Steinberg, DK; Erickson, M; Ducklow, HW. 2013. Microzooplankton Grazing Along the Western Antarctic Peninsula. Aquatic Microbial Ecology 70(3): 215-232, doi: 10.3354/ame01655.

Gažovič, M; Forbrich, I; Jager, DF; Kutzbach, L; Wille, C; Wilmking, M. 2013. Hydrology Driven Ecosystem Respiration Determines the Carbon Balance of a Boreal Peatland. Science of the Total Environment 463-464: 675-682.

Gettel, GM; Giblin, AE; Howarth, RW. 2013. Controls of Benthic Nitrogen Fixation and Primary Production from Nutrient Enrichment of Oligotrophic, Arctic Lakes. Ecosystems 16(8): 1550-1564, doi: 10.1007/s10021-013-9701-0.

Giasson, M-A; Ellison, AM; Bowden, RD; Crill, PM; Davidson, EA; Drake, JE; Frey, SD; Hadley, JL; Lavine, M; Melillo, JM; Munger, JW; Nadelhoffer, KJ; Nicoll, L; Ollinger, SV; Savage, KE; Steudler, PA; Tang, J; Varner, RK; Wofsy, SC; Foster, DR; Finzi, AC. 2013. Soil Respiration in a Northeastern US Temperate Forest: A 22-year Synthesis. Ecosphere 4(11): 28, doi: 10.1890/es13.00183.1.

Giblin, AE; Tobias, CR; Song, B; Weston, N; Banta, GT; Rivera-Monroy, VH. 2013. The Importance of Dissimilatory Nitrate Reduction to Ammonium (DNRA) in the Nitrogen Cycle of Coastal Ecosystems. Oceanography 26(3): 124-131.

Hallgren, W; Schlosser, CA; Monier, E; Kicklighter, D; Sokolov, A; Melillo, J. 2013. Climate Impacts of a Large-scale Biofuels Expansion. Geophysical Research Letters 40(8): 1624-1630, doi: 10.1002/grl.50352.

Herron, PM; Gage, DJ; Arango Pinedo, C; Haider, ZK; Cardon, ZG. 2013. Better to Light a Candle than Curse the Darkness: Illuminating Spatial Localization and Temporal Dynamics of Rapid Microbial Growth in the Rhizosphere. Frontiers in Plant Science 4: 323.

Heskel, M; Greaves, H; Kornfeld, A; Gough, L; Atkin, OK; Turnbull, MH; Shaver, G; Griffin, KL. 2013. Differential Physiological Responses to Environmental Change Promote Woody Shrub Expansion. Ecological Evolution 3(5): 1149-1162, doi: 10.1002/ece3.525.

Hobara, S; Koba, K; Ae, N; Giblin, AE; Kushida, K; Shaver, GR. 2013. Geochemical Influences on Solubility of Soil Organic Carbon in Arctic Tundra Ecosystems. Soil Science Society of America Journal 77(2): 473-481, doi: 10.2136/sssaj2012.0199.

Hobbie, JE; Hobbie, EA. 2013. Microbes in Nature are Limited by Carbon and Energy: The Starving-survival Lifestyle in Soil and Consequences for Estimating Microbial Rates. Frontiers in Microbiology. 4:324, doi: 10.3389/fmicb.2013.00324.

Hong, GH; Baskaran, M; Church, TM; Conte, M. 2013. Scavenging, Cycling and Removal Fluxes of Po-210 and Pb-210 at the Bermuda Time-series Study Site. Deep-Sea Research II 93: 108-118, doi: 10.1016/j.dsr2.2013.01.005.

Hopkins, F; Gonzalez-Meler, MA; Flower, CE; Lynch, DJ; Czimczik, C; Tang, J; Subke, JA. 2013. Ecosystem-level Controls on Root-rhizosphere Respiration. New Phytologist 199(2): 339-351, doi: 10.1111/nph.12271.

Houlton, BZ; Boyer, E; Finzi, AC; Galloway, J; Leach, A; Liptzin, D; Melillo, J; Rosenstock, TS; Sobota, D; Townsend, AR. 2013. Intentional Versus Unintentional Nitrogen Use in the United States: Trends, Efficiency and Implications. Biogeochemistry 114(1-3): 11-23, doi: 10.1007/s10533-012-9801-5.

Johnson, DS; Short, MI. 2013. Chronic Nutrient Enrichment Increases the Density and Biomass of the Mudsnail, Nassarius obsoletus. Estuaries Coasts 36(1): 28-35, doi: 10.1007/s12237-012-9555-2.

Johnson, LT; Tank, JL; Hall, RO Jr; Mulholland, PJ; Hamilton, SK; Valett, HM; Webster, JR; Bernot, MJ; McDowell, WH; Peterson, BJ; Thomas, SM. 2013. Quantifying the Production of Dissolved Organic Nitrogen in Headwater Streams Using N-15 Tracer Additions. Limnology and Oceanography 58(4): 1271-1285, doi: 10.4319/lo.2013.58.4.1271.

Kicklighter, DW; Hayes, DJ; McClelland, JW; Peterson, BJ; McGuire, AD; Melillo, JM. 2013. Insights and Issues with Simulating Terrestrial DOC Loading of Arctic River Networks. Ecological Applications 23(8): 1817-1836, doi: 10.1890/11-1050.1.

Kinney, EL; Valiela, I. 2013. Changes in Delta N-15 in Salt Marsh Sediments in a Long-term Fertilization Study. Marine Ecology Progress Series 477: 41-U366, doi: 10.3354/meps10147.

Koebsch, F; Glatzel, S; Hofmann, J; Forbrich, I; Jurasinski, G. 2013. CO2 Exchange of a Temperate Fen during the Conversion from Moderately Rewetting to Flooding. Journal of Geophysical Research-Biogeosciences 118(2): 940-950, doi: 10.1002/jgrg.20069.

Lau, E; Fisher, MC; Steudler, PA; Cavanaugh, CM. 2013. The Methanol Dehydrogenase Gene, mxaF, as a Functional and Phylogenetic Marker for Proteobacterial Methanotrophs in Natural Environments. PLoS One 8(2): 12, doi: 10.1371/journal.pone.0056993.

Liu, Y; Zhuang, Q; Chen, M; Pan, Z; Tchebakova, N; Sokolov, A; Kicklighter, D; Melillo, J; Sirin, A; Zhou, G; He, Y; Chen, J; Bowling, L; Miralles, D; Parfenova, E. 2013. Response of Evapotranspiration and Water Availability to Changing Climate and Land Cover on the Mongolian Plateau during the 21st Century. Global Planetary Change 108: 85-99, doi: 10.1016/j.gloplacha.2013.06.008.

Lockfield, KC; Fleeger, JW; Deegan, LA. 2013. Mummichog Fundulus heteroclitus Responses to Long-term, Whole-ecosystem Nutrient Enrichment. Marine Ecology Progress Series 492: 211-222, doi: 10.3354/meps10495.

Lu, XL; Kicklighter, DW; Melillo, JM; Yang, P; Rosenzweig, B; Vorosmarty, CJ; Gross, B; Stewart, RJ. 2013. A Contemporary Carbon Balance for the Northeast Region of the United States. Environmental Science & Technology 47(23): 13230-13238, doi: 10.1021/es403097z.

Lunau, M; Voss, M; Erickson, M; Dziallas, C; Casciotti, K; Ducklow, H. 2013. Excess Nitrate Loads to Coastal Waters Reduces Nitrate Removal Efficiency: Mechanism and Implications for Coastal Eutrophication. Environmental Microbiology 15(5): 1492-1504, doi: 10.1111/j.1462-2920.2012.02773.x.

Lunch, CK; LaFountain, AM; Thomas, S; Frank, HA; Lewis, LA; Cardon, ZG. 2013. The Xanthophyll Cycle and NPQ in Diverse Desert and Aquatic Green Algae. Photosynthesis Research 115(2-3): 139-151, doi: 10.1007/s11120-013-9846-x.

Macedo, MN; Coe, MT; DeFries, R; Uriarte, M; Brando, PM; Neill, C; Walker, WS. 2013. Land-use-driven Stream Warming in Southeastern Amazonia. Philosophical Transactions of the Royal Society B-Biological Sciences 368(1619): 9, doi: 10.1098/rstb.2012.0153.

Mather, ME; Finn, JT; Kennedy, CG; Deegan, LA; Smith, JM. 2013. What Happens in an Estuary Doesn't Stay There: Patterns of Biotic Connectivity Resulting from Long Term Ecological Research. Oceanography 26(3): 168-179.

Meredith, MP; Venables, HJ; Clarke, A; Ducklow, HW; Erickson, M; Leng, MJ; Lenaerts, JTM; van den Broeke, MR. 2013. The Freshwater System West of the Antarctic Peninsula: Spatial and Temporal Changes. Journal of Climate 26(5): 1669-1684, doi: 10.1175/jcli-d-12-00246.1.

Moran, XAG; Ducklow, HW; Erickson, M. 2013. Carbon Fluxes through Estuarine Bacteria Reflect Coupling with Phytoplankton. Marine Ecology Progress Series 489: 75-85, doi: 10.3354/meps10428.

Neill, C; Coe, MT; Riskin, SH; Krusche, AV; Elsenbeer, H; Macedo, MN; McHorney, R; Lefebvre, P; Davidson, EA; Scheffler, R; Figueira, AM; Porder, S; Deegan, LA. 2013. Watershed Responses to Amazon Soya Bean Cropland Expansion and Intensification. Philosophical Transactions of the Royal Society B-Biological Sciences 368(1619): 7, doi: 10.1098/rstb.2012.0425.

Nelson, JA; Stallings, CD; Landing, W; Chanton, J. 2013. Biomass Transfer Subsidizes Nitrogen to Offshore Food Webs. Ecosystems, doi: 10.1007/s10021-013-9672-1.

Oberbauer, SFS; Elmendorf, C; Troxler, T; Hollister, RD; Rocha, A; Bret-Harte, S; Fosaa, AM; Høye, TT; Henry, GHR; Jarrad, F; Jonsdottir, IS; Klanderud, K; Klein, JA; Molau, U; Rixen, C; Schmidt, NM; Shaver, G; Slider, R; Totland, Ø; Wahren, C-H; Welker, JM. 2013. Phenological Responses of Tundra Plants to Background Climate Warming Tested Using the International Tundra Experiment (ITEX). Proceedings of the Royal Society B-Biological Sciences 368: 20120481, doi: 10.1098/rstb.2012.0481.

Olsen, YS; Fox, SE; Hofmann, L; Valiela, I. 2013. Benthic Community Composition and Faunal Stable Isotopic Signatures Differ Across Small Spatial Scales in a Temperate Estuary. Marine Environmental Research 86: 12-20, doi: 10.1016/j.marenvres.2013.02.002.

Pascal, PY; Fleeger, JW; Boschker, HTS; Mitwally, HM; Johnson, DS. 2013. Response of the Benthic Food Web to Short- and Long-term Nutrient Enrichment in Saltmarsh Mudflats. Marine Ecology Progress Series 474: 27-41, doi: 10.3354/meps10090.

Peng, X; Yando, E; Hildebrand, E; Dwyer, C; Kearney, A; Waciega, A; Valiela, I; Bernhard, AE.2012. Differential Responses of Ammonia-oxidizing Archaea and Bacteria to Long-term Fertilization in a New England Salt Marsh. Frontiers in Microbiology 3: 445-445, doi: 10.3389/fmicb.2012.00445.

Rastetter, EB; Yanai, RD; Thomas, RQ; Vadeboncoeur, MA; Fahey, TJ; Fisk, MC; Kwiatkowski, BL; Hamburg, SP. 2013. Recovery from Disturbance Requires Resynchronization of Ecosystem Nutrient Cycles. Ecological Applications 23(3): 621-642.

Riskin, SH; Porder, S; Neill, C; Figueira, A; Tubbesing, C; Mahowald, N. 2013. The Fate of Phosphorus Fertilizer in Amazon Soya Bean Fields. Philosophical Transactions of the Royal Society B-Biological Sciences 368(1619): 11, doi: 10.1098/rstb.2012.0154.

Riskin, SH; Porder, S; Schipanski, ME; Bennett, EM; Neill, C. 2013. Regional Differences in Phosphorus Budgets in Intensive Soybean Agriculture. Bioscience 63(1): 49-54, doi: 10.1525/bio.2013.63.1.10.

Sailley, SF; Ducklow, HW; Moeller, HV; Fraser, WR; Schofield, OM; Steinberg, DK; Garzio, LM; Doney; SC. 2013. Carbon Fluxes and Pelagic Ecosystem Dynamics near Two Western Antarctic Peninsula Adelie Penguin Colonies: An Inverse Model Approach. Marine Ecology Progress Series 492: 253-272, doi: 10.3354/meps10534.

Savage, K; Davidson, EA; Tang, J. 2013. Diel Patterns of Autotrophic and Heterotrophic Respiration among Phenological Stages. Global Change Biology 19(4): 1151-1159, doi: 10.1111/gcb.12108.

Schofield, O; Ducklow, H; Bernard, K; Doney, S; Patterson-Fraser, D; Gorman, K; Martinson, D; Meredith, M; Saba, G; Stammerjohn, S; Steinberg, D; Fraser, W. 2013. Penguin Biogeography along the West Antarctic Peninsula Testing the Canyon Hypothesis with Palmer LTER Observations. Oceanography 26(3): 204-206.

Shaver, GR; Rastetter, EB; Salmon, V; Street, LE; van de Weg, MJ; Rocha, A; van Wijk, MT; Williams, M. 2013. Pan-Arctic Modelling of Net Ecosystem Exchange of CO2. Philosophical Transactions of the Royal Society B-Biological Sciences 368(1624): 13, doi: 10.1098/rstb.2012.0485.

Sistla, SA; Moore, JC; Simpson, RT; Gough, L; Shaver, GR; Schimel, JP. 2013. Long-term Warming Restructures Arctic Tundra without Changing Net Soil Carbon Storage. Nature 497(7451): 615-+, doi: 10.1038/nature12129.

Sul, WJ; Oliver, TA; Ducklow, HW; Amaral-Zettler, LA; Sogin, ML. 2013. Marine Bacteria Exhibit a Bipolar Distribution. Proceedings of the National Academy of Sciences of the United States of America 110(6): 2342-2347, doi: 10.1073/pnas.1212424110.

Tang, JM; Tang, JW. 2013. Linking Spatial Pattern and Biophysical Parameters of Urban Vegetation by Multitemporal Landsat Imagery. Geoscience Remote Sensing Letters, IEEE. 10(5): 1263-1267, doi: 10.1109/lgrs.2013.2259795.

Thiers, BM; Wilson, N; Halling, RE. 2013. Making Scientific Vouchers of North American Macrofungi: How Documenting the Fungi You Encounter Contributes to the Mycoflora of North America. McIlvainea 22(19-24): V22/making_scientific_vouchers.html.

Tomasky-Holmes, G; Valiela, I; Charette, MA. 2013. Determination of Water Mass Ages Using Radium Isotopes as Tracers: Implications for Phytoplankton Dynamics in Estuaries. Marine Chemistry 156: 18-26, doi: 10.1016/j.marchem.2013.02.002.

Valiela, I; Giblin, A; Barth-Jensen, C; Harris, C; Stone, T; Fox, S; Crusius, J. 2013. Nutrient Gradients in Panamanian Estuaries: Effects of Watershed Deforestation, Rainfall, Upwelling, and Within-estuary Transformations. Marine Ecology Progress Series 482: 1-+, doi: 10.3354/meps10358.

Valiela, I; Barth-Jensen, C; Stone, T; Crusius, J; Fox, S; Bartholomew, M. 2013. Deforestation of Watersheds of Panama: Nutrient Retention and Export to Streams. Biogeochemistry 115(1-3): 299-315, doi: 10.1007/s10533-013-9836-2.

van de Weg, MJ; Shaver, GR; Salmon, VG. 2013. Contrasting Effects of Long Term versus Short-Term Nitrogen Addition on Photosynthesis and Respiration in the Arctic. Plant Ecology 214(10): 1273-1286, doi: 10.1007/s11258-013-0250-6.

van de Weg, MJ; Fetcher, N; Shaver, G. 2013. Response of Dark Respiration to Temperature in Eriophorum vaginatum from a 30-year-old Transplant Experiment in Alaska. Plant Ecology & Diversity 6(3-4): 377-381, doi: 10.1080/17550874.2012.729618.

Vihervaara, P; D'Amato, D; Forsius, M; Angelstam, P; Baessler, C; Balvanera, P; Boldgiv, B; Bourgeron, P; Dick, J; Kanka, R; Klotz, S; Maass, M; Melecis, V; Petrik, P; Shibata, H; Tang, J; Thompson, J; Zacharias, S. 2013. Using Long-term Ecosystem Service and Biodiversity Data to Study the Impacts and Adaptation Options in Response to Climate Change: Insights from the Global ILTER Sites Network. Current Opinion in Environmental Sustainability 5(1): 53-66, doi: 10.1016/j.cosust.2012.11.002.

Von Holle, B; Neill, C; Largay, EF; Budreski, KA; Ozimec, B; Clark, SA; Lee, K. 2013. Ecosystem Legacy of the Introduced N-2-fixing Tree Robinia pseudoacacia in a Coastal Forest. Oecologia 172(3): 915-924, doi: 10.1007/s00442-012-2543-1.

Yano, Y; Shaver, GR; Rastetter, EB; Giblin, AE; Laundre, JA. 2013. Nitrogen Dynamics in Arctic Tundra Soils of Varying Age: Differential Responses to Fertilization and Warming. Oecologia 173(4): 1575-1586, doi: 10.1007/s00442-013-2733-5.

Young, JN; Bruggeman, J; Rickaby, REM; Erez, J; Conte, M. 2013. Evidence for Changes in Carbon Isotopic Fractionation by Phytoplankton between 1960 and 2010. Global Biogeochemistry Cycles 27: 505-515.

Zhuang, Q; Chen, M; Xu, K; Tang, J; Saikawa, E; Lu, Y; Melillo, JM; Prinn RG; McGuire, AD. 2013. Response of Global Soil Consumption of Atmospheric Methane to Changes in Atmospheric Climate and Nitrogen Deposition. Global Biogeochemical Cycles 27: 650-663, doi: 10.1002/gbc.20057.

Zickfeld, K; Eby, M; Weaver, AJ; Alexander, K; Crespin, E; Edwards, NR; Eliseev, AV; Feulner, G; Fichefet, T; Forest, CE; Friedlingstein, P; Goosse, H; Holden, PB; Joos, F; Kawamiya, M; Kicklighter, D; Kienert, H; Matsumoto, K; Mokhov, II; Monier, E; Olsen, SM; Pedersen, JOP; Perrette, M; Philippon-Berthier, G; Ridgwell, A; Schlosser, A; Schneider Von Deimling, T; Shaffer, G; Sokolov, A; Spahni, R; Steinacher, M; Tachiiri, K; Tokos, KS; Yoshimori, M; Zeng, N; Zhao, F. 2013. Long-term Climate Change Commitment and Reversibility: An EMIC Intercomparison. Journal of Climate 26: 5782-5809, doi: 10.1175/JCLI-D-12-00584.1.

2012

Amon, RMW; Rinehart, AJ; Duan, S; Louchouarn, P; Prokushkin,A; Guggenberger, G; Bauch,D; Stedmon, C; Raymond, PA; Holmes, RM; McClelland, JW; Peterson, BJ; Walker, SA; and Zhulidov, AV. 2012. Dissolved organic matter sources in large arctic rivers. Geochimica Cosmochimica Acta 94:217-237.

Baese, F., H. Elsenbeer, C. Neill and A. V. Krusche. 2012. Differences in throughfall and net precipitation between soybean and transitional tropical forest in the southern Amazon, Brazil. Agriculture, Ecosystems and Environment 159: 19-28.

Barrett, K., A. V. Rocha, M. J. van de Weg, and G. Shaver. 2012. Vegetation shifts observed in arctic tundra 17 years after fire. Remote Sensing Letters 3(8):729-736.

Bennington, C; Fetcher, N; Vavrek, MC ; Shaver, GR; Cummings, K; and McGraw, JB 2012. Home Site advantage in two long-lived arctic plant species: Results from two thirty-year reciprocal transplant studies. Journal of Ecology 100: 841-851

Berbeco, M., J.M. Melillo, and C. Orians. 2012. Soil warming differentially accelerates decomposition of woody debris. Plant and Soil 356:405–417.

Bowen, JL; Morrison, HG; Hobbie, JE; and Sogin, ML. 2012. Salt marsh sediment diversity: a test of the variability of the rare biosphere among environmental replicates. Isme Journal 6:2014-2023.

Butler, S. M., J.M. Melillo, J.E. Johnson, J. Mohan, P.A. Steudler, H. Lux, E. Burrows, C.L. Vario, T.D. Hill, N. Aponte, and F. Bowles. 2012. Soil warming changes the nitrogen cycle: nitrogen-driven changes in species composition. Oecologia 168:819-828.

Cahoon, SMP; Sullivan, PF ; Shaver, GR; Welker, JM; and Post, E. 2012. Interactions among shrub cover and the soil microclimate may determine future arctic carbon budgets. Ecology Letters. DOI:10.1111/j.12461-0248.2012.01865.x

Deegan, L.A., D.S. Johnson, R.S. Warren, J. Fleeger, S. Fagherazzi, and W. Wollheim. Coastal eutrophication as a driver of salt marsh loss. Nature 490:388-392.

Ducklow, H., A. Orsi, and J. S. Wellner. 2012. Introduction to the special issue on Antarctic oceanography in a changing world. Oceanography 25(3):14-17.

Ducklow, H. W., O. Schofiled, M. Vernet, S. Stammerjohn, and M. Erickson. 2012. Multiscale control of bacterial production by phytoplankton dynamics and sea ice along the western Antarctic Peninsula: A regional and decadal investigation. Journal of Marine Systems 98-99: 26-39.

Dunaj, S. J., J. J. Vallino, M. E. Hines, M. Gay, C. Kobyljanec, and J. N. Rooney-Varga. 2012. Relationships between soil organic matter, nutrients, bacterial community structure, and the performance of microbial fuel cells. Environmental Science & Technology 46(3):1914-1922.

Elmendorf, SC; Shaver, GR and 45 others. 2012. Plot-scale evidence of tundra vegetation changeand links to recent summer warming. Nature Climate Change doi:10.1038/nclimate1465
Euskirchen, E.S., M.S Bret-Harte, G.J. Scott, C. Edgar, and G.R. Shaver. 2012. Seasonal patterns of carbon and water fluxes in three representative ecosystems in the northern foothills of the Brooks Range, Alaska. Ecosphere 3(1):4. http://dx.doi.org/10.1890/ES11-00202.1

Fountain, A. G., J. L. Campbell, E. A. G. Schuur, E. S. Sharon, M. W. Williams, and H. W. Ducklow. 2012. The disappearing cryosphere: Impacts and ecosystem responses to rapid cryosphere loss. BioScience 62: 405-415.

Fox, L., I. Valiela and E. L. Kinney. 2012. Vegetation cover and elevation in long-term experimental nutrient-enrichment plots in Great Sippewissett Salt Marsh, Cape Cod, Massachusetts: Implications for eutrophication and sea level rise. Estuaries and Coasts. doi:10.1007/s12237-012-9479-x

Germer, S., A. Zimmerman, C. Neill, A. V. Krusche and H. Elsenbeer. Disproportionate single species contribution to canopy-soil nutrient flux in an Amazonian rainforest. Forest Ecology and Management 267: 40-49.

Gough, L., J.C. Moore, G.R. Shaver, R.T. Simpson, and D.R. Johnson. 2012. Above- and Belowground Responses of Arctic Tundra Ecosystems to Altered Soil Nutrients and Mammalian Herbivory. Ecology 93: 1683-1694

Grzymski, J. J., C. S. Riesenfeld, T. J. Williams, A. M. Dussaq, H. Ducklow, M. Erickson, R. Cavicchioli and A. E. Murray. 2012. A metagenomic assessment of winter and summer bacterioplankton from Antarctica Peninsula coastal surface waters. The ISME Journal 1-15.

Hobbie, J. E. and E. A. Hobbie. 2012. Amino acid cycling in plankton and soil microbes studied with radioisotopes: measured amino acids in soil do not reflect bioavailability. Biogeochemistry (2012) 107:339–360. Doi: 10.1007/s10533-010-9556-9.

Holmes, R. M., J. W. McClelland, B. J. Peterson, S. E. Tank, E. Bulygina, T. I. Eglinton, V. V. Gordeev, T. Y. Gurtovaya, P. A. Raymond, D. J. Repeta, R. Staples, R. G. Striegl, A. V. Zhulidov, and S. A. Zimov. 2012. Seasonal and annual fluxes of nutrients and organic matter from large rivers to the Arctic Ocean and surrounding seas. Estuaries and Coasts 35:369-382, doi: 10.1007/s12237-011-9386-6.

Houlton, B.Z. , E. Boyer, A. Finzi, J. Galloway, A. Leach,D. Liptzin, J. Melillo, T.S. Rosenstock, D. Sobota, and A R. Townsend. 2012. Intentional vs. unintentional nitrogen use in the United States: Trends, efficiency and Implications. Biogeochemistry. Doi: 10.1007/s10533-012-9801-5.

Huryn, A. and J. E. Hobbie. 2012. Land of Extremes Natural History of Arctic Alaska. University of Alaska Press. 311 pp.

Jiang, Y., Q. Zhuang, D. Mandallaz (2012) Modeling Large Fire Frequency and Burned Area in Canadian Terrestrial Ecosystems with Poisson Models. Environ. Model Assess, doi:10.1007/s10666-012-9307-5.

Jiang Y., Q. Zhuang, S. Schaphoff, S. Sitch, A. Sokolov, D. Kicklighter6 & J. Melillo. 2012. Uncertainty analysis of vegetation distribution in the northern high latitudes during the 21st century with a dynamic vegetation model. Ecology and Evolution. 2:1-27. doi: 10.1002/ece3.85.

Jiang, Y., Q. Zhuang, and J. A. O’Donnell (2012), Modeling thermal dynamics of active layer soils and near-surface permafrost using a fully coupled water and heat transport model, J. Geophys. Res., 117, D11110, doi:10.1029/2012JD017512.

Knapp, AK, MD Smith, SE Hobbie, SL Collins, TJ Fahey, GJA Hansen, DA Landis, KJ La Pierre, JM Melillo, TR Seastedt, GR Shaver, and JR Webster. 2012. Past, Present and Future Roles of Long-term Experiments in the LTER Network. BioScience 62: 377-389 DOI:10.1525/bio.2012.62.4.9

Lang, S, Cornelissen, H; Shaver, G; Ahrens, M; Callaghan, T; Molau, U; ter Braak, C; Hölzer, A, & Aerts, R. 2012. Arctic warming on two continents has consistent negative effects on lichen diversity and mixed effects on bryophyte diversity. Global Change Biology 18:1096-1107.

Lunau, M., M. Voss, M. Erickson, C. Dziallas, K. Casciotti and H. Ducklow. 2012. Excess nitrate loads to coastal waters reduces nitrate removal efficiency: mechanism and implications for coastal eutrophication. Environmental Microbiology.

Luo, Y-W., H. W. Ducklow, M. A. M. Friedrichs, M . J. Church, D. M. Karl and S. C. Doney. 2012. Interannual variability of primary production and dissolved organic nitrogen storage in the North Pacific Subtropical Gyre. Journal of Geophysical Research 117, G03019.

Neumann, R.B. and Z. G. Cardon. 2012. Tansley Review - The magnitude of hydraulic redistribution by plant roots: a review and synthesis of empirical and modeling studies. New Phytologist 194:337-352.

Peng, X., E. Yando, E. Hildebrand, C. Dwyer, A. Kearney, A. Waciega, I. Valiela and A. E. Bernhard. 2012. Differential responses of ammonia-oxidizing archaea and bacteria to long-term fertilization in a New England salt marsh. Front. Microbio. 3:445. doi: 10.3389/fmicb.2012.00445

Potts, D. L., K. N. Suding, G. C. Winston, A. V. Rocha, and M. L. Goulden. 2012. Ecological effects of experimental drought and prescribed fire in a southern California coastal grassland. Journal of Arid Environments. doi:10.1016/j.jariden.2012.01.00

Raciti, S., T. Fahey, B. Hall, C. Driscoll, F. J. Carranti, D. Foster, P. S. Gwyther, J. Jenkins, J. Jenkins, S. Hamburg, C. Neill, S. Ollinger, B. W. Peery, E. Quigley, R. Sherman, R. Q. Thomas, M. Vadeboncoeur, D. Weinstein, G. Wilson, P. Woodbury and W. Yandik. Local scale carbon budgets and mitigation opportunities for the Northeastern United States. BioScience 62:23-38.

Robertson, G. P., S. L. Collins, D. R. Foster, N. Brokaw, H. W. Ducklow, T. L. Gragson, C. Gries, S. K. Hamilton, A. D. McGuire, J. C. Moore, E. H. Stanley, R. B. Waide, and M. W. Williams. 2012. Long-term ecological research in a human-dominated world. BioScience 62(4): 342-353.

Rocha, AV, MM Loranty, PE Higuera, MC Mack, FS Hu, BM Jones, AL Breen, EB Rastetter, SJ Goetz, and GR Shaver. 2012. The footprint of Alaskan tundra fires during the past half-century: implications for surface properties and radiative forcing. Environmental Research Letters 7 (2012) 044039.

Shatova, O., D. Koweek, M.H. Conte and J.C. Weber. 2012. Contribution of zooplankton fecal pellets to deep ocean particle flux in the Sargasso Sea assessed using quantitative image analysis. Journal of Plankton Research 34 (10):905-921

Street, LE, GR Shaver, EB Rastetter, MT van Wijk, Kaye BA, and M Williams. 2012. Incident radiation and the allocation of nitrogen within arctic plant canopies: Implications for predicting gross primary productivity. Global Change Biology 18: 2838-2852.

Tank, S. E., M. Manizza, R. M. Holmes, J. W. McClelland, and B. J. Peterson. 2012. The processing and impact of dissolved riverine nitrogen in the Arctic Ocean. Estuaries and Coasts 35:401-415, doi:10.1007/s12237-011-9417-3.

Valiela, I., L. Camilli, T. Stone, A. Giblin, J. Crusius, S. Fox, C. Barth-Jensen, R. Oliveira Monteiro, J. Tucker, P. Martinetto, and C. Harris. 2012. Increased rainfall remarkably freshens estuarine and coastal waters on the Pacific coast of Panama: Magnitude and likely effects on upwelling and nutrient supply. Global and Planetary Change 92-93: 130–137.

Yang, X., J. F. Mustard, J. Tang, and H. Xu. 2012. Regional-scale phenology modeling based on meteorological records and remote sensing observations. J. Geophys. Res. 117, G03029, doi:10.1029/2012JG001977.

Yi, Y., J. J. Gibson, L. W. Cooper, J.-F. Hélie, S. J. Birks, J. W. McClelland, R. M. Holmes, and B. J. Peterson. 2012. Isotopic signals (18O, 2H, 3H) of six major rivers draining the Pan-Arctic watershed. Global Biogeochemical Cycles 26, GB1027, doi:10.1029/2011GB004159.

2011

Beaulieu, J.J., J. L. Tank, S. K. Hamilton, W. M. Wollheim, R. O. Hall, Jr., P. J. Mulholland, B. J. Peterson, L. R. Ashkenas, L. W. Cooper, C. N. Dahm, W. K. Dodds, N. B. Grimm, S. L. Johnson, W. H. McDowell, G. C. Poole, H. M. Valett, C. P. Arango, M. J. Bernot, A. J. Burgin, C. L. Crenshaw, A. M. Helton, L. T. Johnson, J. M. O’Brien, J. D. Potter, R. W. Sheibley, D. J. Sobota, and S. M. Thomas. 2011. Nitrous oxide emission from denitrification in stream and river networks. Proceedings of the National Academy of Sciences PNAS 2011 108 (1) 214-219.

Bijoori, N.S., D. E. Pataki, A. V. Rocha, and M. L. Goulden. 2011. The application of δ18O and δD for understanding water pools and fluxes in a Typha marsh. Plant, Cell and Environment doi: 10.1111/j.1365-3040.2011.02372.

Boelman, N. T., A. V. Rocha, and G. R. Shaver. 2011. Understanding burn severity sensing in Arctic tundra: Exploring vegetation indices, suboptimal assessment timing and the impact of increasing pixel size. International Journal of Remote Sensing. iFirst, 2011, 1-24.

Bowen, J. L., B. B. Ward, H. G. Morrison, J. E. Hobbie, I. Valiela, L. A. Deegan and M. L. Sogin. 2011. Microbial community composition in sediments resists perturbation by nutrient enrichment. The ISME Journal doi:10.1038/ismej.2011.22

Butler, S. M., J. M. Melillo, J. E. Johnson, J. E. Mohan, P. A. Stuedler, H. Lux, E. Burrows, R. M. Smith, C. L. Vario, L. Scott, T. D. Hill, N. Aponte, and F. P. Bowles. 2011. Soil warming alters nitrogen cycling in a New England forest: implications for ecosystem function and structure. Oecologia : DOI 10.1007/s00442-011-2133-7.

Cao, S., G. Sun, Z. Zhang, L. Chen, Q. Feng, B. Fu, S. McNulty, D. Shankman, J. Tang, Y. Wang, and X. Wei. 2011. Greening China naturally. Ambio 40: 828-831.

Chen, L., Z. Zhang, Z. Li, J. Tang, P. Caldwell, W. Zhang. 2011. Biophysical control of whole tree transpiration under an urban environment in Northern China. Journal of Hydrology 402: 388-400. doi:10.1016/j.jhydrol.2011.03.03

Condon, R. H., D. K. Steinberg, P. A. del Giorgio, T. C. Bouvier, D. A. Bronk, W. M. Graham and H. W. Ducklow. 2011. Jellyfish blooms result in a major microbial respiratory sink of carbon in marine systems. PNAS 108 (25) 10225-10230.

Ducklow, H. W., K. M. S. Myers, M. Erickson, J-F. Ghiglione, and A. E. Murray. 2011. Response of summertime Antarctic marine bacterial community to glucose and ammonium enrichment. Aquatic Microbial Ecology 64:205-220.

Forbrich, I. L. Kutzbach, C. Wille, T. Becker, J. Wu and M. Wilmking. 2011. Cross-evaluation of measurements of peatland methane emissions on microform and ecosystem scales using high-resolution landcover classification and source weight modelling. Agricultural and Forest Meteorology 151(7):864–874.

Galford, G.L., J. M. Melillo, D. W. Kicklighter, J. F. Mustard, T. W. Cronin, C. E. P. Cerri and C. C. Cerri. 2011. Historical carbon emissions and uptake from the agricultural frontier of the Brazilian Amazon. Ecological Applications 21(3): 750–763.

Harmon, M. E., B. Bond-Lamberty, J. Tang and R. Vargas. 2011. Heterotrophic respiration in disturbed forests: A review with examples from North America. Journal of Geophysical Research 116: G00K04, doi: 10.1029/2010JG001495

Hayhoe, S. J., C. Neill, S. Porder, R.McHorney, P. LeFebvre, M. T. Coe, H. Elsenbeer and A. V. Krusche. 2011. Conversion to soy on the Amazonian agricultural frontier increases streamflow without affecting stormflow dynamics. Global Change Biology 17: 1821–1833.

Johnson, D. S. 2011. High-marsh invertebrates are susceptible to eutrophication. Marine Ecology Progress Series 438: 143–152.

Johnson, D.R., M.J. Lara, G.R. Shaver, G.O. Batzli, J.D. Shaw and C.E. Tweedie. 2011. Exclusion of brown lemmings reduces vascular plant cover and biomass in arctic coastal tundra: resampling of a 50+ year herbivore exclosure experiment near Barrow, Alaska. Environmental Research Letters. 6: doi:10.1088/1748-9326/6/4/045507

Kinney, E. L. and I. Valiela. 2011. Nitrogen loading to Great South Bay: Land use, sources, retention, and transport from land to Bay. Journal of Coastal Research 27: 672-686.

Liu S., B. Bond-Lamberty, J. A. Hicke, R. Vargas, S. Zhao, J. Chen, S. L. Edburg, J. Liu, A. D. McGuire, J. Xiao, R. Keane, W. Yuan, J. Tang, Y. Luo, C. Potter, and J. Oeding. 2011. Simulating the impacts of disturbances on forest carbon cycling in North America: Processes, data, models, and challenges. Journal of Geophysical Research-Biogeosciences 116, G00K08.

Loranty, M. M., S. J. Goetz, E. B. Rastetter, A. V. Rocha, G. R. Shaver, E. R. Humphreys, and P. M. Lafleur. 2011. Scaling an instantaneous model of tundra NEE to the Arctic landscape. Ecosystems 14: 76-93.

Mack, M.C., M.S. Bret-Harte, T.N. Hollingsworth, R .R. Jandt, E.A.G. Schuur, G.R. Shaver, and D.L. Verbyla. 2011. Carbon loss from an unprecedented Arctic tundra wildfire. Nature 475:489-492.

Martinetto, P., M. Teichberg, I. Valiela, D. Montemayor, and O. Iribarne. 2011. Top-down and bottom-up regulation in a high nutrient–high herbivory coastal ecosystem. Marine Ecology Progress Series 432:69-82.

Melillo J. M., S. Butler, J. Johnson, J. Mohan, P. A. Steudler, H. Lux, E. Burrows, F. Bowles, R. Smith, T. Hill, C.Vario, A. J. Burton, Y. Zhou, J. Tang, 2011. Soil warming, carbon-nitrogen interactions and forest carbon budgets, PNAS, 108: 9508-9512.

Moran, X. A. G., H. W. Ducklow, and M. Erickson. 2011. Single-cell physiological structure and growth rates of heterotrophic bacteria in a temperate estuary (Waquoit Bay, Massachusetts). Limnology and Oceanography 56(1):37-48

Moseman-Valtierra S, R. Gonzalez, K. Kroeger, J. Tang, W. Chao, J. Crusius, J. Bratton, A. Green and J. Shelton. 2011. Short-term nitrogen additions can shift a coastal wetland from a sink to a source of N2O. Atmospheric Environment 45: 4390-4397.

Peters, D. P. C., A. E. Lugo, F. S. Chapin III, S. T. A. Pickett, M. Duniway, A. V. Rocha, F. J. Swanson, C. Laney and J .Jones. 2011. Cross-system comparisons elucidate disturbance complexities and generalities. Ecosphere 2(7)3-26.

Pollard, P. C., and H. Ducklow. 2011. Ultrahigh bacterial production in a eutrophic subtropical Australian river: Does viral lysis short-circuit the microbial loop? Limnology and Oceanography 56(3): 1115-1129.

Rastetter, E.B. 2011. Modeling coupled biogeochemical cycles. Frontiers in Ecology and the Environment 9:68-73

Rietsma, C. S., R. O. Monteiro, and I. Valiela. 2011. Plant cover, herbivory, and resiliency in a Cape Cod salt marsh: Multi-year responses and recovery flowwing manipulation of nutrients and competition. 2011. Estuaries and Coasts 34:198-210.

Rocha A., and G.R. Shaver. 2011. Post-fire energy exchange in Arctic tundra: The importance and climatic implications of burn severity. Global Change Biology 17:2831-2841; DOI: 10.1111/J.1365-2486.2011.02441

Rocha, A.V., and G. R. Shaver. 2011. Burn severity influences postfire CO2 exchange in arctic tundra. Ecological Applications 21(2):477-489.

Skogen, K. A., K. E. Holsinger and Z. G. Cardon. 2011. Nitrogen deposition, competition and the decline of a regionally threatened legume, Desmodium cuspidatum. Oecologia 165:261–269.

Vallino, J. J. 2011. Differences and implications in biogeochemistry from maximizing entropy production locally versus globally. Earth System Dynamics 2: 69-85, doi:10.5194/esd-2-69-2011.

Wang, Z., C. B. Schaaf, M. J. Chopping, A. H. Strahler, J. Wang, M. O.Román, A. V. Rocha, C. E. Woodcock, and Y. Shuai. (2011) Evaluation of Moderate-resolution Imaging Spectroradiometer (MODIS) snow albedo product (MCD43A) over tundra. Remote Sensing of Environment doi:10.1016/j.rse.2011.10.002.

Xia, L. C., J. A. Steele, J. A, Cram, Z. G. Cardon, S. L. Simmons, J. J. Vallino, J. A. Fuhrman, F. Sun. 2011. Extended local similarity analysis (eLSA) of microbial community and other time series data with replicates. BMC Systems Biology, 5(Suppl 2):S15, 12 pp., doi: 10.1186/1752-0509-5-S2-S15

Zhou, Y.M., J. Tang, J.M. Melillo, S. Butler, J.E. Mohan. 2011. Root standing crop and chemistry after six years of soil warming in a temperate forest. Tree Physiology 31: 707-717. doi: 10.1093/treephys/tpr066

2010

Bahn, M., M. Reichstein, E. A. Davidson, J. Grünzweig, M. Jung, M. S. Carbone, D. Epron, L. Misson, Y. Nouvellon, O. Roupsard, K. Savage, S. E. Trumbore, C. Gimeno, J. Curiel Yuste, J. Tang, R. Vargas, and I. A. Janssens. 2010. Soil respiration at mean annual temperature predicts annual total across vegetation types and biomes. Biogeosciences 7: 2147-2157.

Bernhard, A. E., Z. C. Landry, A. Blevins, J. R. de la Torre, A. E. Giblin, and D. A. Stahl. 2010. Abundance of ammonia-oxidizing archaea and bacteria along an estuarine salinity gradient in relation to potential nitrification rates. Applied and Environmental Microbiology. 76 (4) : 1285-1289. 10.1128/AEM.02018-09.

Bokhorst, S., J. W. Bjerke, J. Melillo, T. V. Callaghan, and G. K. Phoenix. 2010. Impacts of extreme winter warming events on litter decomposition in a sub-Arctic heathland. Soil Biology & Biochemistry. 42 (4) : 611-617. 10.1016/j.soilbio.2009.12.011

Briggs, M. A., M. N. Gooseff, B. J. Peterson, K. Morkeski, W. M.Wollheim, and C. S. Hopkinson. 2010. Surface and hyporheic transient storage dynamics throughout a coastal stream network. Water Resources Research. 46 : Art. No. W06516. 10.1029/2009WR008222

Brin, L. D., I. Valiela, D. Goehringer and B. Howes. 2010. Nitrogen interception and export by experimental salt marsh plots exposed to chronic nutrient addition. Marine Ecoogy Progress Series 400:3-17

Buesseler, K. O., A. M. P. McDonnell, O. M. E. Schofield, D. K. Steinberg and H. W. Ducklow. 2010. High particle export over the continental shelf of the west Antarctic Peninsula. Geophysical Research Letters 37:L22606

Cai, W-J., G. W. Luther III, J. C. Cornwell, and A. Giblin. 2010. Carbon cycling and the coupling between proton and electron transfer reactions in aquatic sediments in Lake Champlain. Aquat Geochem 16:421–446 DOI 10.1007/s10498-010-9097-9.

Cleveland, C. C., B. Z. Houlton, C. Neill, S. C. Reed, A. R. Townsend, and Y. P. Wang. 2010. Using indirect methods to constrain symbiotic nitrogen fixation rates: a case study from an Amazonian rain forest. Biogeochemistry 99 (1-3) : 1-13. 10.1007/s10533-009-9392-y

Fleeger, J. W., D. S. Johnson, K. R. Carman, P. B. Weisenhorn, A. Gabriele, D. Thistle, and J. P. Barry. 2010. The response of nematodes to deep-sea CO2 sequestration: a quantile regression approach. Deep-sea Research I 57:696-707.

Fox, S. E., Y. S. Olsen, M. Teichberg and I. Valiela. 2010. Controls acting on benthic macrophyte communities in a temperate and tropical estuary, pp. 203-226. In: M. J. Kennish and H. W. Paerl (eds.) Coastal Lagoons: Critical Habitats of Environmental Change. CRC Press

Galford, G. L., J. M. Melillo, D. W. Kicklighter, T. W. Cronin, C. E. P. Cerri, J. F. Mustard, and C. C. Cerri. 2010. Greenhouse gas emissions from alternative futures of deforestation and agricultural management in the southern Amazon. Proceedings of the National Academy of Sciences 107 (46) : 19649-19654 . 10.1073/pnas.1000780107

Galford, G. L., J. M. Melillo, J. F. Mustard, C. E. P. Cerri, and C. C. Cerri. 2010. The Amazon frontier of land-use change: croplands and consequences for greenhouse gas emissions. Earth Interactions (doi: 10.1175/2010E1327.1).

Germer, S, C. Neill, A. V. Krusche and H. Elsenbeer. 2010. Influence of land-use change on near-surface hydrological processes: Undisturbed forest to pasture. Journal of Hydrology 380:473-480.

Giblin, A .E., N. B. Weston, G. T. Banta, J. Tucker and C. S. Hopkinson. 2010. The effects of salinity on nitrogen losses from an oligohaline estuarine sediment. Estuaries and Coasts DOI: 10.1007/s12237-010-9280-7.

Hasagawa, Y. and J. E. Hobbie. 2010. Application of molecular knowledge of microbes to studies of ecological processes: Why the integration is so challenging. Bulletin of the Ecological Society of America 91:68-79.

Herron, P.M., D. J. Gage and Z. G. Cardon. 2010. Micro-scale water potential gradients visualized in soil around plant root tips using microbiosensors. Plant, Cell, and Environment 33: 199-210.

Janssens, I. A., W. Dieleman, S. Luyssaert, J-A. Subke, M. Reichstein, R. Ceulemans, P. Ciais, A. J. Dolman, J. Grace, G. Matteucci, D. Papale, S. L. Piao, E-D. Schulze, J. Tang and B.E. Law. 2010. Reduction of forest soil respiration in response to nitrogen deposition. Nature Geoscience doi:10.1038/ngeo844 Review

Koop-Jakobsen, K., and A. E. Giblin. 2010. The effect of increased nitrate loading on nitrate reduction via denitrification and DNRA in salt marsh sediments Limnology and Oceanography 55: 789-802.

Liang, N., T. Hirano, Z.-M. Zheng, J. Tang and Y. Fujinuma. 2010. Soil C02 efflux of a larch forest in northern Japan. Biogeosciences 7:3447-3457

Luo, Y-W., M. A. M. Friedrichs, S. C. Doney, M. J. Church, and H. W. Ducklow. 2010. Oceanic heterotrophic bacterial nutrition by semilabile DOM as revealed by data assimilative modeling. Aquatic Microbial Ecology 60:273-287.

Mather, ME; Finn, JT; Pautzke, SM; Fox, D; Savo,y T; Brundage, HM; Deegan, LA; Muth, RM. 2010. Diversity in destinations, routes and timing of small adult and sub-adult striped bass Morone saxatilis on their southward autumn migration. Journal of Fish Biology77 (10) : 2326-2337. 10.1111/j.1095-8649.2010.02811.x

McGuire, AD; Hayes, DJ; Kicklighter, DW; Manizza, M; Zhuang, Q; Chen, M; Follows, MJ; Gurney, KR; McClelland, JW; Melillo, JM; Peterson, BJ; Prinn, RG . 2010. An analysis of the carbon balance of the Arctic Basin from 1997 to 2006. Tellus Series B. 62 (5) : 455-474. 10.1111/j.1600-0889.2010.00497.x

Melillo, JM; Kicklighter, DW; Tian, H; Butler, S. 2010. Fertilizing Change: Carbon-nitrogen interactions and carbon storage in land ecosystems. In: Hillel, D. and C. Rosenzweig (Eds). 2010. Handbook of Climate Change and Agroecosystems: Impacts, Adaptation, and Mitigation. Imperial College Press. London. 438pp.

Montes-Hugo, M., C. Sweeney, S. C. Doney, H. Ducklow, R. Frouin, D. G. Martinson, S. Stammerjohn and O. Schofield. 2010. Seasonal forcing of summer dissolved inorganic carbon and chlorophyll a on the western shelf of the Antarctic Peninsula. Journal of Geophysical Research 115, C03024, doi:10.1029/2009JC0005267

Moran, X. A. G., A. Calvo-Diaz, and H.W. Ducklow. 2010. Total and phytoplankton mediated bottom-up control of bacterioplankton change with temperature in NE Atlantic shelf waters. Aquatic Microbial Ecology 58:229-239

Olsen, Y. S., S. E. Fox, E. K. Kinney, M. Teichberg, and I. Valiela. 2010. Differences in urbanization and degree of marine influence are reflected in δ13C and δ15N of producers and consumers in seagrass habitats of Puerto Rico. Marine Environmental Research 69: 198–206.

Pautzke, SM; Mather, ME; Finn, JT; Deegan, LA; Muth, RM . 2010. Seasonal use of a New England estuary by foraging contingents of migratory striped bass. Transactions of the American Fisheries Society 139 (1) : 257-269. 10.1577/T08-222.1.

Potter, J. D., W. H. McDowell, J. L. Merriam, B. J. Peterson and S. M. Thomas. 2010. Denitrification and total nitrate uptake in streams of a tropical landscape. Ecological Applications 20(8): 2104-2115

Rastetter, E. B. M. Williams, K. L. Griffin, B. L. Kwiatkowski, G. Tomasky, M. J. Potosnak, P.C. Stoy, G. R. Shaver, M. Stieglitz, J. E. Hobbie, and G. W. Kling. 2010. Processing arctic eddy-flux data using a simple carbon-exchange model embedded in the ensemble Kalman filter. Ecological Applications 2010 20:5, 1285-1301

Rocha, A. V., and M. L. Goulden. 2010. Drought legacies influence the long-term carbon balance of a freshwater marsh. Journal of Geophysical Research 115, G00H02, doi:10.1029/2009JG001215

Sabine, C. L., H. Ducklow and M. Hood. 2010. International Carbon Coordination: Roger Revelle's Legacy in the Intergovernmental Oceanographic Commission. Oceanography 23(3):24-37.

Schofield, O., H. W. Ducklow, D. G. Martinson, M. P. Meredith, M. A. Moline, and W. R. Fraser. 2010. How do polar marine ecosystems respond to rapid climate change? Science 328:1520-1523.

Searchinger, TD; Hamburg, SP; Melillo, J; Chameides, W; Havlik, P; Kammen, DM; Likens, GE; Obersteiner, M; Oppenheimer, M; Robertson, GP; Schlesinger, WH; Lubowski, R; Tilman, GD . 2010. Bioenergy: Counting on incentives--Response. Science 327 (5970) : 1200-a. 10.1126/science.327.5970.1200-a

Searchinger, TD; Hamburg, SP; Melillo, J; Chameides, W; Havlik, P; Kammen, DM; Likens, GE; Obersteiner, M; Oppenheimer, M; Robertson, GP; Schlesinger, WH; Tilman, GD; Lubowski, R . 2010. Carbon calculations to consider--Response. Science 327 (5967) : 781-a. 10.1126/science.327.5967.781-a

Sokolov, AP; Stone, PH; Forest, CE; Prinn, R; Sarofim, MC; Webster, M; Paltsev, S; Schlosser, CA; Kicklighter, D; Dutkiewicz, S; Reilly, J; Wang, C; Felzer, B; Melillo, JM; Jacoby, HD . 2010. CORRIGENDUM: Probabilistic forecast for twenty-first-century climate based on uncertainties in emissions (without policy) and climate parameters. Journal of Climate 23 (8) : 2230-2231. 10.1175/2009JCLI3566.1.

Straza, T.R.A., H. W. Ducklow, A. E. Murray, and D. L. Kirchman. 2010. Abundance and single-cell activity of bacterial groups in Antarctic coastal waters. Limnology and Oceanography 55(6):2526-2536.

Tian, HQ; Chen, GS; Zhang, C; Melillo, JM; Hall, CAS . 2010. Pattern and variation of C:N:P ratios in China's soils: a synthesis of observational data. Biogeochemistry 98 (1-3) : 139-151. 10.1007/s10533-009-9382-0

Vallino, J.J. (2010) Ecosystem biogeochemistry considered as a distributed metabolic network ordered by maximum entropy production. Phil. Trans. R. Soc. B, 365, 1417-1427, doi:10.1098/rstb.2009.0272.

Vargas, R., D. Baldocchi, M. Allen, M. Bahn, T. Black, S. Collins, J. Curiel Yuste, T. Hirano, R. Jassal, J. Pumpanen, and J. Tang, 2010. Looking deeper into the soil: biophysical controls and seasonal lags of soil CO2 production and efflux. Ecological Applications 20: 1569-1582.

Weston, NB; Giblin, AE; Banta, GT; Hopkinson, CS; Tucker J. 2010. The effects of varying salinity on ammonium exchange in estuarine sediments of the Parker River, Massachusetts. Estuaries and Coasts 33:985-1003.

Yanai, RD; Battles, JJ; Richardson, AD; Blodgett, CA; Wood, DM; Rastetter, EB . 2010. Estimating uncertainty in ecosystem budget calculations. Ecosystems 13 (2) : 239-248. 10.1007/s10021-010-9315-8

Yano, Y., G. R. Shaver, A. E. Giblin, E. B. Rastetter, and K. J. Nadelhoffer. 2010. Nitrogen dynamics in a small arctic watershed: Retention and downhill movement of 15N. Ecological Monographs 80 (2): 331-351.

Yano, Y., G. R. Shaver, A. E. Giblin and E. B. Rastetter. 2010. Depleted 15N in hydrolysable-N of arctic soils and its implication for mycorrhizal fungi-plant interaction. Biogeochemistry. 97 (2-3):183-194

York, J. K., G. Tomasky, I. Valiela and A. E. Giblin. 2010. Isotopic approach to determining the fate of ammonium regenerated from sediments in a eutrophic sub-estuary of Waquoit Bay, MA. Estuaries and Coasts 33: 1069-1079.

Zhao, LZ; Chen, CS; Vallino, J; Hopkinson, C; Beardsley, RC; Lin, HC; Lerczak, J . 2010. Wetland-estuarine-shelf interactions in the Plum Island Sound and Merrimack River in the Massachusetts coast. Journal of Geophysical Research C: Oceans. 115 : Art. No. C10039. 10.1029/2009JC006085.

2009

Amaral-Zettler, L. A., E. A. McCliment, H. W. Ducklow, and S. M. Huse. 2009. A method for Studying protistan diversity using massively parallel sequencing of V9 hypervariable regions of small-subunit ribosomal RNA genes. PLoS ONE 4(7): e6372. doi:10.1371/journal.pone.0006372.

Balshi, M. S., A. D. McGuire, P. Duffy, M. Flannigan, D. W. Kicklighter and J. Melillo. 2009. Vulnerability of carbon storage in North American boreal forests to wildfires during the 21st century. Global Change Biology 15:1491-1510.

Bowen, J. L., B. C. Crump, L. A. Deegan, and J. E. Hobbie. 2009. Increased supply of ambient nitrogen has minimal effect on salt marsh bacterial production. Limnology and Oceanography 54:713 - 722 .

Bowen, J. L., B. C. Crump, L. A. Deegan, and J. E. Hobbie. 2009. Salt marsh sediment bacteria: their distribution and response to external nutrient inputs. The ISME Journal 3:924 - 934 doi:10.1038/ismej.2009.44.

Bradford, M. A., M. D. Wallenstein, S. D. Allison, K. K. Treseder, S. D. Frey, B. W. Watts, C. A. Davies, T. R. Maddox, J. M. Melillo, J. E. Mohan, and J. F. Reynolds. 2009. Decreased mass specific respiration under experimental warming is robust to the microbial biomass method employed. Ecology Letters. 12 (7): E15-E18.

Buchsbaum, R. N., L. A. Deegan, J. Horowitz, R. H. Garritt, J. P. Ludlam, and D. H. Shull. 2009. Effects of regular salt marsh haying on marsh plants, algae, invertebrates and birds at Plum Island Sound, Massachusetts. Wetlands Ecology and Management 17:469-487 DOI 10.1007/s11273-008-9125-3.

Bustamante, M.M.C., H. Watson, J. Melillo, D.J. Connor, H. Hardy, E. Lambin, H. Lotze-Campen, N.H. Ravindranath, T.D. Searchinger and J. Tschirley. 2009. What are the final land limits? Pp. 271-291, chapter 16, in R.W. Howarth and S. Bringezu, eds. Biofuels: Environmental Consequences and Interactions with Changing Land Use.

Campioli, M., L. E. Street , A. Michelsen, G. R. Shaver, T. Maere, R. Samson and R. Lemeur. 2009. Determination of leaf area index, total foliar N, and normalized difference vegetation index for Arctic ecosystems dominated by Cassiope tetragona. Arctic, Antarctic, and Alpine Research 41(4):426–433.

Carmichael, R.H., E. Gaines, Z. Sheller, A. Tong, A. Clapp, and I. Valiela. 2009. Diet composition of juvenile horseshoe crabs: Implications for growth and survival of natural and cultured stocks, pp. 521-534. In : Biology and Conservation of Horseshoe Crabs, J.T. Tanacredi, M.L. Botton, D. Smith, (eds.) Springer.

Carmichael, R. H., T. Hattenrath, I. Valiela, R. H. Michener. Nitrogen stable isotopes in the shell of Mercenaria mercenaria trace wastewater inputs from watershed to estuarine ecosystems. Aquatic Biology 4:99-111.

Castro, P., I. Valiela, and H. Freitas. 2009. Sediment pool and plant content as indicators of nitrogen regimes in Portuguese estuaries. Journal of Experimental Marine Biology and Ecology 380:1–10.

Chaves, J., C. Neill, S. Germer, S. Gouveia Neto, A. V. Krusche, A. Castellanos Bonilla and H. Elsenbeer. 2009. Nitrogen transformations in flowpaths leading from soils to streams in Amazon forest and pasture. Ecosystems 12: 961-972.

Crump, B. C., B. J. Peterson, P. A. Raymond, R. M. W. Amon, A. Rinehart, J. W. McClelland, R. M. Holmes. 2009. Circumpolar synchrony in big river bacterioplankton. Proceedings of the National Academy of Sciences 106 (50) : 21208-21212. 10.1073/pnas.0906149106.

Drake, D. C.. B. J. Peterson, K. A. Galván, L. A. Deegan, C. Hopkinson, J. M. Johnson, K. Koop-Jakobsen, L. E. Lemay, C. Picard. 2009. Salt marsh ecosystem biogeochemical responses to nutrient enrichment: a paired 15N tracer study. Ecology: Vol. 90, No. 9, pp. 2535-2546.

Ducklow, H. W., S. C. Doney and D. K. Steinberg. Contributions of long-term research and time series observations to marine ecology and biogeochemistry. Annual Reviews of Marine Science 1:279-302.

Ducklow, H. W., X. A. G. Moran and A. E. Murray. Bacteria in the greenhouse: Marine microbes and climate change. Pp 1-32 in Environmental Microbiology, 2nd Edition. R. Mitchell and J. Gu, eds. Wiley-Blackwell, New York, 375 pp.

Felzer, B. S., T. W. Cronin, J. M. Melillo, D. W. Kicklighter and C. A. Schlosser. 2009. Importance of carbon-nitrogen interactions and ozone on ecosystem hydrology during the 21st century. Journal of Geophysical Research 114, G01020, doi: 10.1029/2008JG000826.

Fennel, K., D. Brady, D. DiToro, R.W. Fulweiler, W. S. Gardner, A. Giblin, M. J. McCarthy, A. Rao, S. Seitzinger, M. Thouvenot-Korppoo and C. Tobias. 2009. Modeling denitrification in aquatic sediments. Biogeochemistry. 93: 159-178.

Fox, S. E., M. Teichberg, Y.S. Olsen, L. Heffner and I. Valiela. 2009. Restructuring of benthic communities in eutrophic estuaries: lower abundance of prey leads to trophic shifts from omnivory to grazing. Marine Ecology Progress Series 380:43-57

Geisz, H., R. Dickhut, M. Cochran, W. Fraser, and H. Ducklow. 2009. Response to Comment on 'Melting glaciers: a Probable Source of DDT to the Antarctic Marine Ecosystem'. Environmental Science & Technology. 43 (10) : 3974-3975. 10.1021/es900639g

Germer, S., C. Neill. T. Vetter, J. Chaves, A. V. Krusche and H. Elsenbeer. 2009. Implications of long-term land-use change on the hydrology and solute budgets of small catchments in Rondônia (Brazil). Journal of Hydrology 364: 349-363.

Giblin, A.E. 2009. Iron and Manganese. In: The Encyclopedia of Inland Waters. Gene Likens, Editor in Chief. Elsevier Press.

Haas, H. L., C. J. Freeman, J. M. Logan, L. A. Deegan and E. F. Gaines. 2009. Examining mummichog growth and movement: Are some individuals making intra-season migrations to optimize growth?Journal of Experimental Marine Biology And Ecology 2009. 369(1): p. 8-16.

Hall, R. O., J.L. Tank, D. J. Sobota, P.J. Mulholland, J. M. O'Brien, W.K. Dodds, J. R. Webster, H. M. Valett, G. C. Poole, B.J. Peterson, J. L. Meyer, W. H. McDowell, S.L. Johnson, S. K. Hamilton, N. B. Grimm, S. V. Gregory, C. N. Dahm, L. W. Cooper, L. R. Ashkenas, S. M. Thomas, R. W. Sheibley, J. D. Potter, B. R. Niederlehner, L. T. Johnson, A. M. Helton, C. M. Crenshaw, A. J. Burgin, M. J. Bernot, J. J. Beaulieu, and C. P. Arango. Nitrate removal in stream ecosystems measured by N-15 addition experiments: Total uptake. Limnology and Oceanography. 54 (3) : 653-665.

Harrison, J., R, Maranger, R. Alexander, A. E. Giblin, P.-A. Jacinthe, E. Mayorga, S. Seitzinger, D. Sobota and W. Wollheim. 2009. The regional and global significance of nitrogen removal in lakes and reservoirs. Biogeochemistry 93: 143-157.

Helmke P., S. Neuer, M. W. Lomas, M. H. Conte and T. Freudenthal . 2009. Cross-basin differences in the organic carbon export and flux attenuation in the subtropical North Atlantic Gyre. Deep-Sea Res. I, 10.1016/j.dsr.2009.11.001

Herron, P.M., J.M. Stark, C. Holt, T. Hooker and Z. G. Cardon. 2009. Microbial growth efficiencies across a soil moisture gradient assessed using 13C-acetic acid vapor and 15N-ammonia gas.Soil Biology and Biochemistry 41:1262-1269.

Hobbie J. E., E. A. Hobbie, J.C. Weber, J. Shamhar, H. Drossman, and M. H. Conte. 2009. Mycorrhizal fungi supply nitrogen to host plants in arctic tundra and boreal forests: 15N is the key signal. Can. J. Microbiology 55, 84-94.

Huang, S. and M. Conte. 2009. Source/process apportionment of major and trace elements in sinking particles in the Sargasso Sea. Geochim. Cosmochim. Acta 73(1): 65-90.

Johnson, D. S., J. W. Fleeger and L. A. Deegan. 2009. Large-scale manipulations reveal that top-down and bottom-up controls interact to alter habitat utilization by saltmarsh fauna. Marine Ecology Progress Series 377:33-41.

Karl, T. R., J. M. Melillo, T. C. Peterson (eds.). 2009. Global Climate Change Impacts in the United States. Cambridge University Press.

Kirchman, D.L., X. A. G. Morán and H. Ducklow. 2009. Microbial growth in the polar oceans – role of temperature and potential impact of climate change. Nature Reviews Microbiology 7:451-459.

Kniffin, M., C. Neill, R. M. McHorney and G. Gregory. Nutrient limitation of periphyton and phytoplankton in Cape Cod coastal plain ponds. Northeastern Naturalist 16:395-408.

Koop-Jakobsen, K. and A.E. Giblin. 2009. Anammox in tidal marsh sediments: The role of salinity, nitrogen loading and marsh vegetation. Estuaries and Coasts 32:1559-2723..

Koop-Jakobsen, K., and A. E. Giblin. 2009. A new approach for measuring denitrification in the rhizosphere of vegetated marsh sediments. Limnology and Oceanography: Methods 7:626 - 637.

Lu, Y., Q. Zhuang, G. Zhou, A. Sirin, J. Melillo and D. Kicklighter. Possible decline of the carbon sink in the Mongolian Plateau during the 21st century, Environmental Research Letters 4 045023 (8pp).

MacIntyre, S., J. P. Fram, N. D. Bettez, W. J. O’Brien, J. E. Hobbie, and G. W. Kling. 2009. Climate related variations in mixing dynamics of an Alaskan arctic lake. Limnology and Oceanography 54 2401-2417.

Manizza, M., M. J. Follows, S. Dutkiewicz, J. W. McClelland, D. Menemenlis, C. N. Hill, A. Townsend-Small, B. J. Peterson. Modeling transport and fate of riverine dissolved organic carbon in the Arctic Ocean. Global Biogeochemical Cycles. 23 : Art. No. GB4006

Melillo, J.M., J.M. Reilly, D.W. Kicklighter, A.C. Gurgel, T.W. Cronin, S. Paltsev, B.S. Felzer, A.P. Sokolov and C.A.Schlosser. Indirect Emissions from Biofuels: How Important? Science 326:1397-1399.

Melillo, J. M., A.C. Gurgel, D. W. Kicklighter, J. M. Reilly, T. W. Cronin, B. S. Felzer, S. Paltsev, C. A. Schlosser, A. P. Sokolov and X. Wang. 2009. Unintended environmental consequences of a global biofuels program. MIT JPSPGC, Report 168, January, 32 pp.

Mather, M. E., J. T. Finn, K. H. Ferry, L. A. Deegan and G. A. Nelson. 2009. Use of non-natal estuaries by migratory striped bass (Morone saxatilis) in summer. Fishery Bulletin 107(3): 329-337

Montes-Hugo, M. A., H. Ducklow, and O. M. Schofield. 2009. Contribution by different marine bacterial communities to particulate beam attenuation. Marine Ecology Progress Series 379:13-22.

Montes-Hugo, M., S. C. Doney, H. W. Ducklow, W. Fraser, D. Martinson, S. E. Stammerjohn and O. Schofield. 2009. Recent changes in phytoplankton communities associated with rapid regional climate change along the Western Antarctic Peninsula. Science 323: 1470-1473

Mortazavi, B., M. H. Conte, J. Chanton, M. C. Smith, J. C. Weber, J. Crumsey and J. Ghashghaie. 2009. Does the 13C of foliage respired CO2 and biochemical pools reflect the 13C of recently assimilated carbon? Plant, Cell and Environment, 32, 1310-1323

Mulholland, P. J. R. O. Hall, D. J. Sobota, W. K. Dodds, S. E. G. Findlay, N. B. Grimm, S. K. Hamilton, W. H. McDowell, J. M. O'Brien, J. L. Tank, L. R. Ashkenas, L. W. Cooper, C. N. Dahm, S. V. Gregory, S. L. Johnson, J. L. Meyer, B. J. Peterson, G. C. Poole, H. M. Valett, J. R. Webster, C. P. Arango, J. J. Beaulieu, M. J. Bernot, A. J. Burgin, C. L. Crenshaw, A. M. Helton, L. T. Johnson, B. R. Niederlehner, J. D. Potter, R. W.Sheibley, and S. M. Thomas. 2009. Nitrate removal in stream ecosystems measured by 15N addition experiments: Denitrification. Limnology and Oceanography 54 (3):666-680.

Neill, C., M. O. Bezerra, R. McHorney and C. B. O’Dea. 2009. Distribution, species composition and management implications of seed banks in southern New England coastal plain ponds. Biological Conservation 142:1350-1361.

Olsen, Y., S, E. Foxa, E. L. Kinney, M. Teichberg and I. Valiela. Differences in urbanization and degree of marine influence are reflected in δ13C and δ15N of producers and consumers in seagrass habitats of Puerto Rico. Marine Environmental Research. E-first. 10.1016/j.marenvres.2009.10.005.

Olsrud, M., B. A. Carlsson, B.M Svensson, A. Michelsen, J.M. Melillo. Responses of fungal root colonization, plant cover and leaf nutrients to long-term exposure to elevated atmospheric CO2 and warming in a subarctic birch forest understory. Global Change Biology doi: 10.1111/j.1365-2486.2009.02079.

Roberts, K. A., C. Xu, C.-C Huang, M. H. Conte, P. H. Santschi (2009) Scavenging and fractionation of thorium vs. protactinium in the ocean, as determined from particle-water partioning experiments with sediment trap material from the Gulf of Mexico and Sargasso Sea. Earth Planet. Sci. Letts., 286, 131-138

Rocha, A. V. and G. R. Shaver. 2009. Advantages of a two band EVI calculated from solar and photosynthetically active radiation fluxes. Agricultural and Forest Meteorology 149(9): 1560-1563

San Gil, I., K. Baker, J. Campbell, E. G. Denny, K. Vanderbilt, B. Riordan, R. Koskela, J. Downing, S. Grabner, E. Melendez, J. Walsh, M, Kortz, J. Conners, L. Yarmey , N. Kaplan, E. Boose L. Powell, C. Gries, R. Schroeder , T. Ackerman, K. Ramsey, B. Benson, J. Chipman, J. Laundre, R. Garritt, D. Henshaw, B. Collins, C. Gardner, S. Bohm, M. O'Brien, J. Gao, W. Sheldon, S. Lyon, D. Bahauddin, M. Servilla, D. Costa and J. Brunt. 2009. The Long-Term Ecological Research community metadata standardisation project: A progress report. International Journal of Metadata, Semantics and Ontologies 4(3): 141 - 153

Searchinger, T., S. Hamburg, J. Melillo, W. Chameides, P. Havlik, D. Kammen, G. Likens, R. Lubowski, M. Obersteiner, M. Oppenheimer, G. P. Robertson, W. Schlesinger and G. D. Tilman. 2009. Fixing a critical climate accounting error. Science 326:527-528.

Sokolov, A. P., P. H. Stone, C. E. Forest, R. Prinn, M. C. Sarofim, M. Webster, S. Paltsev, C. A. Schlosser, D. Kicklighter, S. Dutkiewicz, J. Reilly, C. Wang, B. Felzer, J.M. Melillo and H. D. Jacoby. 2009. Probabilstic Forecast for 21st Century Climate Based on Uncertainties in Emissions (without Policy) and Climate Parameters. Journal of Climate 22(19):5175–5204.

Straza, T.R.A., M. T. Cottrell, H. W. Ducklow, and D. L. Kirchman. 2009. Geographic and phylogenetic variation in bacterial biovolume as revealed by protein and nucleic acid staining. Appl. Environ. Microbiol. 75: 4028-4034.

Tang, J., P.V. Bolstad, and J.G. Martin. 2009. Soil carbon fluxes and stocks in a Great Lakes forest chronosequence. Global Change Biology 15: 145-155.

Tomasella, J., C. Neill, R. Figueiredo and A. D. Nobre. 2009. Water and chemical budgets at the catchment scale including nutrient exports from intact forests and disturbed landscapes. In: M. Keller, M. Bustamante, J. Gash and P. S. Dias (eds), Amazonia and Global Change, Geophysical Monograph Series, Volume 186, American Geophysical Union, Washington, DC. 576 pp.

Valiela, I. 2009. Doing science: Design, analysis and communication of scientific research. Second edition. 333 pp. Oxford University Press, New York.

Valiela, I., E. Kinney, J. Culbertson, E. Peacock, and S. Smith. 2009. Global losses of mangroves and salt marshes: Magnitudes, causes and consequences. In C. Duarte (ed.). Global Loss of Coastal Habitats: Magnitudes, Causes, and Consequences. Fundacion BBVA. Madrid.

Wookey, P.A., R. Aerts, R.D. Bardgett, F. Baptist, K.A. Bråthen, J.H.C. Cornelissen, L. Gough, I.P. Hartley, D.W. Hopkins, S. Lavorel, and G.R. Shaver. 2009. Ecosystem Feedbacks and cascade processes: understanding their role in the responses of arctic and alpine ecosystems to environmental change. Global Change Biology 15:1153-1172.

2008

Bowden, W. B., M. N. Gooseff, A. Balser, A. Green, B. J. Peterson, and J. Bradford. 2008. Sediment and nutrient delivery from thermokarst features in the foothills of the North Slope, Alaska: Potential impacts on headwater stream ecosystems. J. Geophys. Res., 113, G02026, doi:10.1029/2007JG000470.

Bowen, J. L., and I. Valiela. 2008.Using delta15N to assess coupling between watersheds and estuaries in temperate and tropical regions. Journal of Coastal Research 24(3) 804-813.

Bret-Harte, M. S., M. C. Mack, G. R. Goldsmith, D. B. Sloan, J. DeMarco, G. Shaver , P. M. Ray, Z. Biesinger, and F. S. Chapin III. 2008. Plant functional types do not predict biomass responses to removal and fertilization in Alaskan tussock tundra. Journal of Ecology: DOI: 10.1111/j.1365-2745.2008.01378.

Cardon, Z. G., D. W. Gray, and L. A. Lewis. 2008. The green algal underground – evolutionary secrets of desert cells. BioScience 58(2): 114-122.

Colinvaux, P. 2008. Amazon Expeditions: My Quest for the Ice-Age Equator. Yale University Press, New Haven and London. 328 pp.

Cooper, L. W., J. W. McClelland, R. M. Holmes, P. A. Raymond, J. J. Gibson, C. K. Guay, and B. J. Peterson. 2008. Flow-weighted values of runoff tracers (δ18O, DOC, Ba, alkalinity) from the six largest Arctic rivers. Geophys. Res. Lett. 35, L18606, doi:10.1029/2008GL035007.

Davidson, E. A., G. P. Asner, T. A. Stone, C. Neill, and R. O. Figueiredo. 2008. Objective indicators of pasture degradation from spectral mixture analysis of Landsat imagery. Journal of Geophysical Research G: Biogeosciences. 113 : Art. No. G00B03. 10.1029/2007JG000622

Desai, A.R., A.N. Noormets, P.V. Bolstad, J. Chen, B.D. Cook, P.V. Curtis, K.J. Davis, E.S. Euskirchen, C. Gough, J.M. Martin, D.M. Ricciuto, H.P. Schmid, H. Su, J. Tang, C. Vogel, W. Wang, 2008. Influence of vegetation type, stand age and climate on carbon dioxide fluxes across the Upper Midwest, USA: Implications for regional scaling of carbon flux. Agricultural and Forest Meteorology, 148: 288-308.

Drake, D. C., B. J. Peterson, L. A. Deegan, L. A. Harris, E. E. Miller, and R.S. Warren. 2008. Plant nitrogen dynamics in fertilized and natural New England saltmarshes: A paired 15N tracer study. Marine Ecology Progress Series 354:35-46.

Ducklow, H. 2008.Microbial services: Challenges for microbial ecologists in a changing world. Aquatic Microbial Ecology 53:13-19.

Ducklow, H. W., M. Erickson, J. Kelly, M. Montes-Hugo, C. A. Ribic, R. C. Smith, S. E. Stammerjohn, and D. M. Karl. 2008. Particle export from the upper ocean over the continental shelf of the west Antarctic Peninsula: A long-term record, 1992-2007. Deep-Sea Research II 55: 2118-2131.

Ducklow, H. W. 2008. Long-term studies of the marine ecosystem along the west Antarctic Peninsula. Deep-Sea Research II 55:1945-1948.

Ducklow, H. W., S. C. Doney and D. K. Steinberg. 2008. Contributions of long-term research and time-series observations to marine ecology and biogeochemistry. Annual Review of Marine Science 1:279–302

Ewers, B.E., D.S. Mackay, J. Tang, P. Bolstad, and S. Samanta. 2008. Intercomparison of sugar maple stand transpiration responses to environmental conditions from the western Great Lakes Region of the United States. Agricultural and Forest Meteorology, 148: 231-246.

Fox, S. E., E. Stieve, I. Valiela, J. Hauxwell, and J. McClelland. 2008. Macrophyte abundance in Waquoit Bay: Effects of land-derived nitrogen loads on seasonal and multi-year biomass patterns. Estuaries and Coasts. 31 (3) : 532-541. 10.1007/s12237-008-9039-6.

Fry, B., M. Cieri, J. Hughes, C. Tobias, L. A. Deegan, and B. Peterson. 2008. Stable isotope monitoring of benthic-pelagic coupling with salt marsh fish. Marine Ecology Progress Series 369:193-204.

Gage, D.J., P.H. Herron, C. A. Pinedo, and Z. G. Cardon. 2008. Live reports from the soil grain – the promise and challenge of microbiosensors. Functional Ecology 22: 983-989

Galford, G.L., J. F. Mustard, J. M. Melillo, A. Gendrin, C. C. Cerri and C. E. P. Cerri. 2008. Wavelet analysis of MODIS time series to detect expansion and intensification of row-crop agriculture in Brazil. Remote Sensing of Environment: 112(2):576-587.

Gasol, J. M., J. Pinhassi, L. Alonso-Sáez, H. Ducklow, G. J. Herndl, M. Koblížek, M. Labrenz, Y. Luo, X. A. G. Morán, T. Reinthaler, and M. Simon. 2008. Towards a better understanding of microbial carbon flux in the sea. Aquatic Microbial Ecology 53: 21-38.

Geisz, H. N., R. M. Dickhut, M. A. Cochran, W. R. Fraser and H. W. Ducklow. 2008. Melting glaciers: A probable source of DDT to the Antarctic marine ecosystem. Environ. Sci. Technol. 10.1021/es702919n

Hobbie, E. A., and J. E. Hobbie. 2008. Natural abundance of 15N in nitrogen-limited forests and trundra can estimate nitrogen cycling through mycoorrhizal fungi: A review. Ecosystems 11:815-830.

Hobbie, J. E., and J. Laybourn-Parry. 2008. Heterotrophic microbial processes in polar lakes. Pages 197-212 in W. F. Vincent and J. Laybourn-Parry, editors. Polar Lakes and Rivers: Limnology of Arctic and Antarctic Aquatic Ecosystems. Oxford University Press, Oxford.

Holmes, R. M, J. W. McClelland, P. A. Raymond, B. B. Frazer, B. J. Peterson, and M.Stieglitz. 2008. Lability of DOC transported by Alaskan rivers to the arctic ocean. Geophysical Research Letters. 35 (3) : Art. No. L03402. 10.1029/2007GL032837

Knapp, A.K., J. M. Briggs, S.L. Collins, S.R. Archer, M.S. Bret-Harte, B.E. Ewers, D.P. Peters, D.R. Young, G.R. Shaver, E.Pendall, and M. B. Cleary. 2008. Shrub encroachment in North American grasslands: shift in growth form dominance rapidly alters control of ecosystem C inputs. Global Change Biology 14(3):615-623.

Lambers, H., J. A. Raven, G. Shaver and S. E. Smith. 2008. Specialised nutrient-acquisition strategies reflect plant adaptations to changing N and P status as soils change over geological time scales. Trends in Ecology and Evolution 23(2): 95-103.

McClintock, J., H. Ducklow, and W. Fraser. 2008. Ecological responses to climate change on the Antarctic Peninsula. American Scientist 96: 302-310

McKnight, D. M., M. N. Gooseff, W. F. Vincent, and B. J. Peterson. 2008. High-latitude rivers and streams. Pages 83-102 in W. F. Vincent and J. Laybourn-Parry, editors. Polar Lakes and Rivers: Limnology of Arctic and Antarctic Aquatic Ecosystems. Oxford University Press, Oxford.

McNamara, J., D. Kane, J. Hobbie, and G. Kling. 2008. Hydrologic and biogeochemical controls on the spatial and temporal patterns of nitrogen and phosphorus in the Kuparuk River, arctic Alaska. Hydrological Processes doi:10.1002/hyp.6920.

Morán, X. A. G., and A. Calvo-Díaz. 2008. Single-cell vs. bulk activity properties of coastal bacterioplankton over an annual cycle in a temperate ecosystem. FEMS Microbiol. Ecol. 1–14.

Mulholland, P. J., A. M. Helton, G.C. Poole, R.O. Hall, Jr., S. K. Hamilton, B. J. Peterson, J.L. Tank, L.R. Ashkenas, L. W. Cooper, C. N. Dahm, W. K. Dodds, S. E. G. Findlay, S. V. Gregory, N.B. Grimm, S. L. Johnson, W.H. McDowell, J. L. Meyer, H. M.Valett, J. R. Webster, C. P. Arango, J. J. Beaulieu, M. J. Bernot, A. J. Burgin, C. L. Crenshaw, L.T. Johnson, B. R. Niederlehner, J. M. O’Brien, J. D. Potter, R.W. Sheibley, D. J. Sobota, and S. M. Thomas. 2008. Stream denitrification across biomes and its response to anthropogenic nitrate loading. Nature 452: 202-205.

Nowinski, N., S. E. Trumbore, E. Schuur, M. Mack, and G. Shaver. 2008. Nutrient addition prompts rapid destabilization of organic matter in an Arctic tundra ecosystem. Ecosystems 11:16-25.

Robertson, G. P. V. H. Dale, O. C. Doering, S. P. Hamburg, J. M. Melillo, M. M. Wander, W. J. Parton, P. R. Adler, J. N. Barney, R. M..Cruse, C. S. Duke, P. M. Fearnside, R. F. Follett, H. K. Gibbs, J. Goldemberg, D. J. Mladenoff, D. Ojima, M. W. Palmer, A. Sharpley, L. Wallace, K. C. Weathers, J. A. Wiens, and W. W.Wilhelm. 2008. Sustainable Biofuels Redux. Science. 322 (5898) : 49-50. 10.1126/science.1161525.

San Gil, I., W. Sheldon, T. Schmidt, M. Servilla, R. Aguilar, C. Gries, T. Gray, D. Field, J. Cole, J. Pan, G. Palanisamy, D. Henshaw, M. O’Brien, L. Kinkel, K. McMahon, R. Kottmann, L. Amaral-Zettler, J. Hobbie, P. Goldstein, R. P. Guralnick, J. Brunt, and W. K. Michener. 2008. Defining linkages between the GSC and NSF's LTER Program: How the ecological metadata language (EML) relates to GCDML and other outcomes. OMICS: A Journal of Integrative Biology 12(2): 151-156 doi:10.1089/omi.2008.0015.

Tang, J., P.V. Bolstad, A.R. Desai, J.G. Martin, B.D. Cook, K.J. Davis, E.V. Carey, 2008. Ecosystem respiration and its components in an old-growth forest in the Great Lakes region of the United States. Agricultural and Forest Meteorology, 148: 171-185.

Teichberg, M., S. E. Fox, C. Aguila, Y. S. Olsen, and I. Valiela. 2008. Macroalgal responses to experimental nutrient enrichment in shallow coastal waters: growth, internal nutrient pools, and isotopic signatures. Marine Ecology Progress Series 368:117-126.

Valiela, I., and S. E. Fox. 2008. Managing Coastal Wetlands. Science 319: 290-291.

Valiela, I., and S. Fox. 2008. Mechanisms of ecological control over time: Evidence from coastal ecosystems, pp. 223-243 In: F. Valladares, A. Camacho, A. Elosegui, M. Estrada, C. Gracia, J. C. Senar and J. M. Gili (eds) Unity in Diversity. Ed Rubes, Fundación BBVA, Madrid.

Vincent, W.F. J. E. Hobbie, and J. Laybourn-Parry. 2008. Introduction to high latitude limnology, pp. 1-23. In W.F. Vincent and J. Laybourn-Parry (editors). Polar Lakes and Rivers: Limnology of Arctic and Antarctic Aquatic Ecosystems. Oxford University Press, Oxford.

Wan, Z., J. J. Vallino, and B. J. Peterson. 2008. Study of the inter-annual food web dynamics in the Kuparuk River with a first order approximation inverse model. Ecological Modelling 211:97-112.

Wollheim, W. M., B. J. Peterson, S. M. Thomas, C. H. Hopkinson, and C. J. Vörösmarty. 2008. Dynamics of N removal over annual time periods in a suburban river network. J. Geophys. Res. 113, G03038, doi:10.1029/2007JG000660.

Wollheim, W. M., C. J. Vorosmarty, A. F. Bouwman, P. Green, J. Harrison, E. Linder, B. J. Peterson, S. P. Seitzinger, and J. P. M. Syvitski. 2008. Global N removal by freshwater aquatic systems using a spatially distributed, within-basin approach. Global Biogeochemical Cycles. 22 (2): Art. No. GB2026. 10.1029/2007GB002963

Print Friendly