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LabNotes

January 2007 LabNotes



An electronic newsletter from the Marine Biological Laboratory

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Publications

Amaral-Zettler, LA; Cole, J; Laatsch, AD; Nerad, TA; Anderson, OR; Reysenbach, AL. 2006. Vannella epipetala n. sp isolated from the leaf surface of Spondias mombin (Anacardiaceae) growing in the dry forest of Costa Rica. J Eukaryotic Microbiol 53(6): 522-530.

Armstrong, MT; Theg, SM; Braun, N; Wainwright, N; Pardy, RL; Armstrong, PB. 2006. Histochemical evidence for lipid A (endotoxin) in eukaryote chloroplasts. FASEB J 20(12): 2145-2146.

Cantarel, BL; Morrison, HG; Pearson, W. 2006. Exploring the relationship between sequence similarity and accurate phylogenetic trees. Mol Biol Evol 23(11): 2090-2100.

Chapin, FS; Woodwell, GM; Randerson, JT; Rastetter, EB; Lovett, GM; Baldocchi, DD; Clark, DA; Harmon, ME; Schimel, DS; Valentini, R; Wirth, C; Aber, JD; Cole, JJ; Goulden, ML; Harden, JW; Heimann, M; Howarth, RW; Matson, PA; McGuire, AD; Melillo, JM; Mooney, HA; Neff, JC; Houghton, RA; Pace, ML; Ryan, MG; Running, SW; Sala, OE; Schlesinger, WH; Schulze, ED. 2006. Reconciling carbon-cycle concepts, terminology, and methods. Ecosystems 9(7): 1041-1050.

Corbisier, TN; Soares, LSH; Petti, MAV; Muto, EY; Silva, MHC; McClelland, J; Valiela, I. 2006. Use of isotopic signatures to assess the food web in a tropical shallow marine ecosystem of Southeastern Brazil. Aquatic Ecol 40(3): 381-390.

D'Andrea, WJ; Lage, M; Martiny, JBH; Laatsch, AD; Amaral-Zettler, LA; Sogin, ML; Huang, YS. 2006. Alkenone producers inferred from well-preserved 18S rDNA in Greenland lake sediments. J Geophys Res G: Biogeosci 111(G3): Art. No. G03013.

Feigl, B; Cerri, C; Piccolo, M; Noronha, N; Augusti, K; Melillo, J; Eschenbrenner, V; Melo, L. 2006. Biological survey of a low-productivity pasture in Rondonia state, Brazil. Outlook on Agriculture 35(3): 199-208.

Gerlach, G. 2006. Pheromonal regulation of reproductive success in female zebrafish: Female suppression and male enhancement. Animal Behav 72(5): 1119-1124.

Grant, P; Zheng, Y; Pant, HC. 2006. Squid (Loligo pealei) giant fiber system: A model for studying neurodegeneration and dementia? Biol Bull 210(3): 318-333.

Hansson, K; Thamlitz, AM; Furie, B; Furie, BC; Stenflo, J. 2006. A single -carboxyglutamic acid residue in a novel cysteine-rich secretory protein without propeptide. Biochemistry 45(42): 12828-12839.

Howarth, RW; Marino, R. 2006. Nitrogen as the limiting nutrient for eutrophication in coastal marine ecosystems: Evolving views over three decades. Limnol Oceanogr 51(1) Part 2: 364-376.

Hugler, M; Huber, H; Molyneaux, SJ; Vetriani, C; Sievert, SM. 2006. Autotrophic CO2 fixation via the reductive tricarboxylic acid cycle in different lineages within the phylum Aquificae: Evidence for two ways of citrate cleavage. Env Microbiol E-first. 10.1111/j.1462-2920.2006.01118.x

Lyons, MM; Smolowitz, R; Dungan, CF; Roberts, SB. 2006. Development of a real time quantitative PCR assay for the hard clam pathogen Quahog Parasite Unknown (QPX). Diseases of Aquatic Organisms 72(1): 45-52.

Mathger, LM; Hanlon, RT. 2006. Anatomical basis for camouflaged polarized light communication in squid. Biol Lett 2(4): 494-496.

Messerli, SM; Greenberg, RM. 2006. Cnidarian toxins acting on voltage-gated ion channels. Mar Drugs 4(3): 70-81.

Nahum, LA; Reynolds, MT; Wang, ZO; Faith, JJ; Jonna, R; Jiang, ZJ; Meyer, TJ; Pollock, DD. 2006. EGenBio: A data management system for evolutionary genomics and biodiversity. BMC Bioinformatics 7 Suppl. 2: Art. No. S7.

Ochsenreiter, T; Cipriano, M; Hajduk, SL. 2006. KISS: The kinetoplastid RNA editing sequence search tool. RNA E-first. 10.1261/rna.232907

Ochsenreiter, T; Hajduk, SL. 2006. Alternative editing of cytochrome c oxidase III mRNA in trypanosome mitochondria generates protein diversity. EMBO Rep 7(11): 1128-1133.

Paraskevopoulos, C; Bordenstein, SR; Wernegreen, JJ; Werren, JH; Bourtzis, K. 2006. Toward a Wolbachia multilocus sequence typing system: Discrimination of Wolbachia strains present in Drosophila species. Current Microbiol 53(5): 388-395.

Paydarfar, D; Forger, DB; Clay, JR. 2006. Noisy inputs and the induction of on-off switching behavior in a neuronal pacemaker. J Neurophysiol 96(6): 3338-3348.

Satpute-Krishnan, P; DeGiorgis, JA; Conley, MP; Jang, M; Bearer, EL. 2006. A peptide zipcode sufficient for anterograde transport within amyloid precursor protein. PNAS 103(44): 16532-16537.

Shinohara, M; Mikhailov, AV; Aguirre-Ghiso, JA; Rieder, CL. 2006. Extracellular signal-regulated kinase 1/2 activity is not required in mammalian cells during late G2 for timely entry into or exit from mitosis. Mol Biol Cell 17(12): 5227-5240.

Torres, R; Fagherazzi, S; van Proosdij, D; Hopkinson, C. 2006. Salt marsh geomorphology: Physical and ecological effects on landform. Estuarine, Coastal and Shelf Sci 69(3-4): 309-310.

Weissmann, G. 2006. NIH funding: Not a prayer. FASEB J 20(9): 1278-1280.

Zhuang, QL; Melillo, JM; Sarofim, MC; Kicklighter, DW; McGuire, AD; Felzer, BS; Sokolov, A; Prinn, RG; Steudler, PA; Hu, SM. 2006. CO2 and CH4 exchanges between land ecosystems and the atmosphere in northern high latitudes over the 21st century. Geophys Res Lett 33(17): Art. No. L17403.




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