Recent MBL Publications

(as of August 12, 2020)

Lynum, C. A., Bulseco, A. N., Dunphy, C. M., Osborne, S. M., Vineis, J. H., & Bowen, J. L. (2020). Microbial Community Response to a Passive Salt Marsh Restoration. ESTUARIES AND COASTS, 43(6), 1439-1455. doi: 10.1007/s12237-020-00719-y

Zheng, H., Zhou, L., Wei, J., Tang, Q., Zou, Y., Tang, J., & Xu, H. (2020). Cover crops and chicken grazing in a winter fallow field improve soil carbon and nitrogen contents and decrease methane emissions. Sci Rep, 10(1), 12607. doi: 10.1038/s41598-020-69407-y

Domeignoz-Horta, L. A., Pold, G., Liu, X. J. A., Frey, S. D., Melillo, J. M., & DeAngelis, K. M. (2020). Microbial diversity drives carbon use efficiency in a model soil. Nat Commun, 11(1), 3684. doi: 10.1038/s41467-020-17502-z

Watterson, W. J., Tanyeri, M., Watson, A. R., Cham, C. M., Shan, Y., Chang, E. B., Eren, A. M., & Tay, S. (2020). Droplet-based high-throughput cultivation for accurate screening of antibiotic resistant gut microbes. Elife, 9(ARTN e56998). doi: 10.7554/eLife.56998

Yoshii, A., & Green, W. N. (2020). Editorial: Role of Protein Palmitoylation in Synaptic Plasticity and Neuronal Differentiation. Front Synaptic Neurosci, 12, 27. doi: 10.3389/fnsyn.2020.00027

Crawford, K., Diaz Quiroz, J. F., Koenig, K. M., Ahuja, N., Albertin, C. B., & Rosenthal, J. J. C. (2020). Highly Efficient Knockout of a Squid Pigmentation Gene. Current Biology. doi: 10.1016/j.cub.2020.06.099

Longo, W. M., Huang, Y., Russell, J. M., Morrill, C., Daniels, W. C., Giblin, A. E., & Crowther, J. (2020). Insolation and greenhouse gases drove Holocene winter and spring warming in Arctic Alaska. Quaternary Science Reviews, 242(106438), 106438-106438. doi: 10.1016/j.quascirev.2020.106438

Yamamoto, W., & Yuste, R. (2020). “Whole-body imaging of neural and muscle activity during behavior in Hydra vulgaris: effect of osmolarity on contraction bursts”. eNeuro. doi: 10.1523/ENEURO.0539-19.2020

Funikov, S. Y., Rezvykh, A. P., Kulikova, D. A., Zelentsova, E. S., Protsenko, L. A., Chuvakova, L. N., Tyukmaeva, V. I., Arkhipova, I. R., & Evgen’ev, M. B. (2020). Adaptation of gene loci to heterochromatin in the course of Drosophila evolution is associated with insulator proteins. Sci Rep, 10(1), 11893. doi: 10.1038/s41598-020-68879-2
Roden, C., & Gladfelter, A. S. (2020). RNA contributions to the form and function of biomolecular condensates. NATURE REVIEWS MOLECULAR CELL BIOLOGY. doi: 10.1038/s41580-020-0264-6

Grettenberger, C. L., McCauley Rench, R. L., Gruen, D. S., Mills, D. B., Carney, C., Brainard, J., Hamasaki, H., Ramirez, R., Watanabe, Y., Amaral-Zettler, L. A., Ohmoto, H., & Macalady, J. L. (2020). Microbial population structure in a stratified, acidic pit lake in the Iberian Pyrite Belt. GEOMICROBIOLOGY JOURNAL, 37(7), 623-634. doi: 10.1080/01490451.2020.1751748

Utter, D. R., Borisy, G. G., Eren, A. M., Cavanaugh, C. M., & Mark Welch, J. L. (2020). Metapangenomics of the oral microbiome provides insights into habitat adaptation and cultivar diversity. doi: 10.1101/2020.05.01.072496

Hanlon, R. T., & McManus, G. (2020). Flamboyant cuttlefish behavior: Camouflage tactics and complex colorful reproductive behavior assessed during field studies at Lembeh Strait, Indonesia. JOURNAL OF EXPERIMENTAL MARINE BIOLOGY AND ECOLOGY, 529(ARTN 151397). doi: 10.1016/j.jembe.2020.151397

Peredo, E. L., & Cardon, Z. G. (2020). Shared up-regulation and contrasting down-regulation of gene expression distinguish desiccation-tolerant from intolerant green algae. Proc Natl Acad Sci U S A. doi: 10.1073/pnas.1906904117

Rogers, E. T. F., Quraishe, S., Rogers, K. S., Newman, T. A., Smith, P. J. S., & Zheludev, N. (2020). Far-field unlabeled super-resolution imaging with superoscillatory illumination. APL PHOTONICS, 5(6). doi: 10.1063/1.5144918

Townsend, J. P., Gemmell, B. J., Sutherland, K. R., Colin, S. P., & Costello, J. H. (2020). Ink Release and Swimming Behavior in the Oceanic Ctenophore Eurhamphaea vexilligera. Biol Bull, 238(3), 206-213. doi: 10.1086/709504

P. O’Connell, C., Collatos, C., Picha, N. D., & He, P. (2020). A new animal-borne imaging system for studying the behavioral ecology of small sharks: laboratory and field evaluations. MARINE AND FRESHWATER BEHAVIOUR AND PHYSIOLOGY, 53(3), 131-150. doi: 10.1080/10236244.2020.1782753

Begovich, K., Vu, A. Q., Yeo, G., & Wilhelm, J. E. (2020). Conserved metabolite regulation of stress granule assembly via AdoMet. J Cell Biol, 219(8). doi: 10.1083/jcb.201904141

Hernández, C. M., van Daalen, S. F., Caswell, H., Neubert, M. G., & Gribble, K. E. (2020). A demographic and evolutionary analysis of maternal effect senescence. Proc Natl Acad Sci U S A. doi: 10.1073/pnas.1919988117

Guo, M., Li, Y., Su, Y., Lambert, T., Nogare, D. D., Moyle, M. W., Duncan, L. H., Ikegami, R., Santella, A., Rey-Suarez, I., Green, D., Beiriger, A., Chen, J., Vishwasrao, H., Ganesan, S., Prince, V., Waters, J. C., Annunziata, C. M., Hafner, M., Mohler, W. A., Chitnis, A. B., Upadhyaya, A., Usdin, T. B., Bao, Z., Colón-Ramos, D., La Riviere, P., Liu, H., Wu, Y., & Shroff, H. (2020). Rapid image deconvolution and multiview fusion for optical microscopy. Nat Biotechnol. doi: 10.1038/s41587-020-0560-x

Murphy, A. E., Bulseco, A. N., Ackerman, R., Vineis, J. H., & Bowen, J. L. (2020). Sulphide addition favours respiratory ammonification (DNRA) over complete denitrification and alters the active microbial community in salt marsh sediments. Environmental Microbiology, 22(6), 2124-2139. doi: 10.1111/1462-2920.14969

Laissue, P. P., Roberson, L., Gu, Y., Qian, C., & Smith, D. J. (2020). Long-term imaging of the photosensitive, reef-building coral Acropora muricata using light-sheet illumination. Sci Rep, 10(1), 10369. doi: 10.1038/s41598-020-67144-w

Lemonnier, C., Perennou, M., Eveillard, D., Fernandez-Guerra, A., Leynaert, A., Marie, L., Morrison, H. G., Memery, L., Paillard, C., & Maignien, L. (2020). Linking Spatial and Temporal Dynamic of Bacterioplankton Communities With Ecological Strategies Across a Coastal Frontal Area. FRONTIERS IN MARINE SCIENCE, 7(ARTN 376). doi: 10.3389/fmars.2020.00376

Yang, H., Tang, J., Zhang, C., Dai, Y., Zhou, C., Xu, P., Perry, D. C., & Chen, X. (2020). Enhanced Carbon Uptake and Reduced Methane Emissions in a Newly Restored Wetland. JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES, 125(1). doi: 10.1029/2019JG005222

Vallota-Eastman, A., Arrington, E. C., Meeken, S., Roux, S., Dasari, K., Rosen, S., Miller, J. F., Valentine, D. L., & Paul, B. G. (2020). Role of Diversity-Generating Retroelements for Regulatory Pathway Tuning in Cyanobacteria. bioRxiv. doi: 10.1101/2020.05.26.117283

Eugster, W., Laundre, J., Eugster, J., & Kling, G. W. (2020). Long-term reliability of the Figaro TGS 2600 solid-state methane sensor under low-Arctic conditions at Toolik Lake, Alaska. Atmospheric Measurement Techniques, 13(5), 2681-2695. doi: 10.5194/amt-13-2681-2020

Soll, L. G., Eisen, J. N., Vargas, K. J., Medeiros, A. T., Hammar, K. M., & Morgan, J. R. (2020). α-Synuclein-112 Impairs Synaptic Vesicle Recycling Consistent With Its Enhanced Membrane Binding Properties. Front Cell Dev Biol, 8. doi: 10.3389/fcell.2020.00405

Scheff, D. R., Weirich, K. L., Dasbiswas, K., Patel, A., Vaikuntanathan, S., & Gardel, M. L. (2020). Tuning shape and internal structure of protein droplets via biopolymer filaments. Soft Matter. doi: 10.1039/c9sm02462j

Werner, W. J., Sanderman, J., & Melillo, J. M. (2020). Decreased Soil Organic Matter in a Long-Term Soil Warming Experiment Lowers Soil Water Holding Capacity and Affects Soil Thermal and Hydrological Buffering. JOURNAL OF GEOPHYSICAL RESEARCH-BIOGEOSCIENCES, 125(4). doi: 10.1029/2019JG005158

Edsinger, E., Pnini, R., Ono, N., Yanagisawa, R., Dever, K., & Miller, J. (2020). Social tolerance in Octopus laqueus-A maximum entropy model. PLOS ONE, 15(6), e0233834. doi: 10.1371/journal.pone.0233834

Mohl, J. E., Fetcher, N., Stunz, E., Tang, J., & Moody, M. L. (2020). Comparative transcriptomics of an arctic foundation species, tussock cottongrass (Eriophorum vaginatum), during an extreme heat event. Sci Rep, 10(1), 8990. doi: 10.1038/s41598-020-65693-8

Freire, I., Gutner-Hoch, E., Muras, A., Benayahu, Y., & Otero, A. (2019). The effect of bacteria on planula-larvae settlement and metamorphosis in the octocoral Rhytisma fulvum fulvum. PLOS ONE, 14(9). doi: 10.1371/journal.pone.0223214

Helbig, M., Waddington, J. M., Alekseychik, P., Amiro, B. D., Aurela, M., Barr, A. G., Black, T. A., Blanken, P. D., Carey, S. K., Chen, J. Q., Chi, J. S., Desai, A. R., Dunn, A., Euskirchen, E. S., Flanagan, L. B., Forbrich, I., Friborg, T., Grelle, A., Harder, S., Heliasz, M., Humphreys, E. R., Ikawa, H., Isabelle, P. E., Iwata, H., Jassal, R., Korkiakoski, M., Kurbatova, J., Kutzbach, L., Lindroth, A., Lofvenius, M. O., Lohila, A., Mammarella, I., Marsh, P., Maximov, T., Melton, J. R., Moore, P. A., Nadeau, D. F., Nicholls, E. M., Nilsson, M. B., Ohta, T., Peichl, M., Petrone, R. M., Petrov, R., Prokushkin, A., Quinton, W. L., Reed, D. E., Roulet, N. T., Runkle, B. R. K., Sonnentag, O., Strachan, I. B., Taillardat, P., Tuittila, E. S., Tuovinen, J. P., Turner, J., Ueyama, M., Varlagin, A., Wilmking, M., Wofsy, S. C., & Zyrianov, V. (2020). Increasing contribution of peatlands to boreal evapotranspiration in a warming climate. NATURE CLIMATE CHANGE. doi: 10.1038/s41558-020-0763-7

McCoy, M. J., & Fire, A. Z. (2020). Intron and gene size expansion during nervous system evolution. BMC GENOMICS, 21(1), 360. doi: 10.1186/s12864-020-6760-4

Gerbich, T. M., McLaughlin, G. A., Cassidy, K., Gerber, S., Adalsteinsson, D., & Gladfelter, A. S. (2020). Phosphoregulation provides specificity to biomolecular condensates in the cell cycle and cell polarity. J Cell Biol, 219(7). doi: 10.1083/jcb.201910021

Schutte, C. A., Marton, J. M., Bernhard, A. E., Giblin, A. E., & Roberts, B. J. (2020). No Evidence for Long-term Impacts of Oil Spill Contamination on Salt Marsh Soil Nitrogen Cycling Processes. ESTUARIES AND COASTS, 43(4), 865-879. doi: 10.1007/s12237-020-00699-z

Fowler, B. L., Neubert, M. G., Hunter-Cevera, K. R., Olson, R. J., Shalapyonok, A., Solow, A. R., & Sosik, H. M. (2020). Dynamics and functional diversity of the smallest phytoplankton on the Northeast US Shelf. Proc Natl Acad Sci U S A. doi: 10.1073/pnas.1918439117

McLaughlin, G. A., Langdon, E. M., Crutchley, J. M., Holt, L. J., Forest, M. G., Newby, J. M., & Gladfelter, A. S. (2020). Spatial heterogeneity of the cytosol revealed by machine learning-based 3D particle tracking. Mol Biol Cell, mbcE20030210. doi: 10.1091/mbc.E20-03-0210

Shaidani, N. I., McNamara, S., Wlizla, M., & Horb, M. E. (2020). Animal Maintenance Systems: Xenopus laevis. Cold Spring Harb Protoc. doi: 10.1101/pdb.prot106138

Shaidani, N. I., McNamara, S., Wlizla, M., & Horb, M. E. (2020). Animal Maintenance Systems: Xenopus tropicalis. Cold Spring Harb Protoc. doi: 10.1101/pdb.prot106146

Helbig, M., Waddington, J. M., Alekseychik, P., Amiro, B. D., Aurela, M., Barr, A. G., Black, T. A., Blanken, P. D., Carey, S. K., Chen, J., Chi, J., Desai, A. R., Dunn, A., Euskirchen, E. S., Flanagan, L. B., Forbrich, I., Friborg, T., Grelle, A., Harder, S., Heliasz, M., Humphreys, E. R., Ikawa, H., Isabelle, P.-E., Iwata, H., Jassal, R., Korkiakoski, M., Kurbatova, J., Kutzbach, L., Lindroth, A., Löfvenius, M. O., Lohila, A., Mammarella, I., Marsh, P., Maximov, T., Melton, J. R., Moore, P. A., Nadeau, D. F., Nicholls, E. M., Nilsson, M. B., Ohta, T., Peichl, M., Petrone, R. M., Petrov, R., Prokushkin, A., Quinton, W. L., Reed, D. E., Roulet, N. T., Runkle, B. R. K., Sonnentag, O., Strachan, I. B., Taillardat, P., Tuittila, E.-S., Tuovinen, J.-P., Turner, J., Ueyama, M., Varlagin, A., Wilmking, M., Wofsy, S. C., & Zyrianov, V. (2020). Increasing contribution of peatlands to boreal evapotranspiration in a warming climate. NATURE CLIMATE CHANGE. doi: 10.1038/s41558-020-0763-7

Marconi, A., Hancock-Ronemus, A., & Gillis, J. A. (2020). Adult chondrogenesis and spontaneous cartilage repair in the skate, Leucoraja erinacea. Elife, 9. doi: 10.7554/elife.53414

Wang, Y., Wegener, G., Ruff, S. E., & Wang, F. (2020). Methyl/alkyl-coenzyme M reductase-based anaerobic alkane oxidation in archaea. Environ Microbiol. doi: 10.1111/1462-2920.15057

Gurdebeke, P. R., Mertens, K. N., Pospelova, V., Matsuoka, K., Li, Z., Gribble, K. E., Gu, H., Bogus, K., Vrielinck, H., & Louwye, S. (2020). Taxonomic revision, phylogeny, and cyst wall composition of the dinoflagellate cyst genus Votadinium Reid (Dinophyceae, Peridiniales, Protoperidiniaceae). PALYNOLOGY, 44(2), 310-335. doi: 10.1080/01916122.2019.1580627

Hirst, W. G., Biswas, A., Mahalingan, K. K., & Reber, S. (2020). Differences in Intrinsic Tubulin Dynamic Properties Contribute to Spindle Length Control in Xenopus Species. Current Biology. doi: 10.1016/j.cub.2020.03.067

Chakraborty, A., Ruff, S. E., Dong, X., Ellefson, E. D., Li, C., Brooks, J. M., McBee, J., Bernard, B. B., & Hubert, C. R. J. (2020). Hydrocarbon seepage in the deep seabed links subsurface and seafloor biospheres. Proc Natl Acad Sci U S A. doi: 10.1073/pnas.2002289117

Valiela, I., Juman, R., Asmath, H., Hanacek, D., Lloret, J., Elmstrom, E., Chenoweth, K., & Brookshire, E. N. J. (2020). Water quality, nutrients, and stable isotopic signatures of particulates and vegetation in a mangrove ecosystem exposed to past anthropogenic perturbations. REGIONAL STUDIES IN MARINE SCIENCE, 35(ARTN 101208). doi: 10.1016/j.rsma.2020.101208

Watsa, M., Erkenswick, G. A., Pomerantz, A., & Prost, S. (2020). Portable sequencing as a teaching tool in conservation and biodiversity research. PLoS Biol, 18(4), e3000667. doi: 10.1371/journal.pbio.3000667

Rastetter, E. B., & Kwiatkowski, B. L. (2020). An approach to modeling resource optimization for substitutable and interdependent resources. ECOLOGICAL MODELLING, 425(ARTN 109033). doi: 10.1016/j.ecolmodel.2020.109033

Arenas Gómez, C. M., Sabin, K. Z., & Echeverri, K. (2020). Wound healing across the animal kingdom: crosstalk between the immune system and the extracellular matrix. Dev Dyn. doi: 10.1002/dvdy.178