Bell Center Publications 2022 | Marine Biological Laboratory

*Bell Center authors have been bolded

Albertin, C. B., Medina-Ruiz, S., Mitros, T., Schmidbaur, H., Sanchez, G., Wang, Z. Y., Grimwood, J., Rosenthal, J. J. C., Ragsdale, C. W., Simakov, O., & Rokhsar, D. S. (2022). Genome and transcriptome mechanisms driving cephalopod evolution. Nature Communications, 13(1), Article 1. https://doi.org/10.1038/s41467-022-29748-w

Arenas Gómez, C. M., & Echeverri, K. (2021). Chapter Eight - Salamanders: The molecular basis of tissue regeneration and its relevance to human disease. In S. Y. Sokol (Ed.), Current Topics in Developmental Biology (Vol. 145, pp. 235–275). Academic Press. https://doi.org/10.1016/bs.ctdb.2020.11.009

Buresch, K. C., Sklar, K., Chen, J. Y., Madden, S. R., Mongil, A. S., Wise, G. V., Boal, J. G., & Hanlon, R. T. (2022). Contact chemoreception in multi-modal sensing of prey by Octopus. Journal of Comparative Physiology A, 208(3), 435–442. https://doi.org/10.1007/s00359-022-01549-y

Cesare, B., Campomenosi, N., & Shribak, M. (2021). Polychromatic polarization: Boosting the capabilities of the good old petrographic microscope. Geology, 50(2), 137–141. https://doi.org/10.1130/G49303.1

Dellaert, Z., Vargas, P. A., La Riviere, P. J., & Roberson, L. M. (2022). Uncovering the Effects of Symbiosis and Temperature on Coral Calcification. The Biological Bulletin, 242(1), 62–73. https://doi.org/10.1086/716711

Drinkwater, E., Allen, W., Endler, J., Hanlon, R., Holmes, G., Homziak, N., Kang, C., Leavell, B., Lehtonen, J., Loeffler‐Henry, K., Ratcliffe, J., Rowe, C., Ruxton, G., Sherratt, T., Skelhorn, J., Skojec, C., Smart, H., White, T., Yack, J., … Umbers, K. (2022). A synthesis of deimatic behaviour. Biological Reviews. https://doi.org/10.1111/brv.12891

Echeverri, K. (2022). Zebrafishing for enhancers of hearing regeneration. Cell Genomics, 2(9), 100178. https://doi.org/10.1016/j.xgen.2022.100178

Gorbsky, G. J., Daum, J. R., Sapkota, H., Summala, K., Yoshida, H., Georgescu, C., Wren, J. D., Peshkin, L., & Horb, M. E. (2022). Developing immortal cell lines from Xenopus embryos, four novel cell lines derived from Xenopus tropicalis. Open Biology, 12(7). https://doi.org/10.1098/rsob.220089

Houston, D., Elliott, K., Coppenrath, K., Wlizla, M., & Horb, M. (2022). Maternal Wnt11b regulates cortical rotation during Xenopus axis formation: Analysis of maternal-effect wnt11b mutants. Development, 149(17). https://doi.org/10.1242/dev.200552

Kalia, N., Hauser, K. A., Burton, S., Hossainey, M. R. H., Zelle, M., Horb, M. E., & Grayfer, L. (2022). Endogenous Retroviruses Augment Amphibian (Xenopus laevis) Tadpole Antiviral Protection. Journal of Virology, 96(11), e00634-22. https://doi.org/10.1128/jvi.00634-22

Katz, H. R., Arcese, A. A., Bloom, O., & Morgan, J. R. (2022). Activating Transcription Factor 3 (ATF3) is a Highly Conserved Pro-regenerative Transcription Factor in the Vertebrate Nervous System. Frontiers in Cell and Developmental Biology, 10. https://www.frontiersin.org/articles/10.3389/fcell.2022.824036

Kim, D., Buresch, K., Hanlon, R., & Kampff, A. (2022). An experimental method for evoking and characterizing dynamic color patterning of cuttlefish during prey capture. Journal of Biological Methods, 9(2), e161. https://doi.org/10.14440/jbm.2022.386

Kumar, A., Kerr, L., Shribak, M., Oldenbourg, R., & Patel, N. (2022). Reflecting on the Past and Building the Future of Imaging at MBL: Carrying Forward Shinya Inoué’s Legacy. Microscopy and Microanalysis, 28(S1), 1554–1556. https://doi.org/10.1017/s1431927622006249

Marin, Z., Bao, Y., Bewersdorf, J., & Shribak, M. (2022). Inspired By Shinya Inoue: Quantitative Orientation-Independent Differential Interference Contrast Microscopy. Microscopy and Microanalysis, 28(S1), 1548–1549. https://doi.org/10.1017/s1431927622006225

Mäthger, L. M., Bok, M. J., Liebich, J., Sicius, L., & Nilsson, D.-E. (2022). Pupil dilation and constriction in the skate Leucoraja erinacea in a simulated natural light field. Journal of Experimental Biology, 225(4), jeb243221. https://doi.org/10.1242/jeb.243221

Oldenbourg, R. (2022). Elevating Polarized Light Microscopy to the Third Dimension. Microscopy and Microanalysis, 28(S1), 1550–1552. https://doi.org/10.1017/s1431927622006237

Orvis, J., Albertin, C., Shrestha, P., Chen, S., Zheng, M., Rodriguez, C., Tallon, L., Mahurkar, A., Zimin, A., Kim, M., Liu, K., Kandel, E., Fraser, C., Sossin, W., & Abrams, T. (2022). The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of Aplysia. Proceedings of the National Academy of Sciences of the United States of America, 119(28), e2122301119. https://doi.org/10.1073/pnas.2122301119

Pattanayak, R., Underwood, R., Crowley, M. R., Crossman, D. K., Morgan, J. R., & Yacoubian, T. A. (2022). Deletion in chromosome 6 spanning alpha-synuclein and multimerin1 loci in the Rab27a/b double knockout mouse. Scientific Reports, 12(1). https://doi.org/10.1038/s41598-022-13557-8

Santavy, D. L., Jackson, S. K., Jessup, B., Gerritsen, J., Rogers, C., Fisher, W. S., Weil, E., Szmant, A., Cuevas-Miranda, D., Walker, B. K., Jeffrey, C., Bradley, P., Ballantine, D., Roberson, L., Ruiz-Torres, H., Todd, B., Smith, T., Clark, R., Diaz, E., Bauzá-Ortega, J., Horstmann, C. & Raimondo, S. (2022). A biological condition gradient for coral reefs in the US Caribbean Territories: Part I. Coral narrative rules. Ecological Indicators, 138, 108805. https://doi.org/10.1016/j.ecolind.2022.108805

Schmidbaur, H., Kawaguchi, A., Clarence, T., Fu, X., Hoang, O. P., Zimmermann, B., Ritschard, E. A., Weissenbacher, A., Foster, J. S., Nyholm, S. V., Bates, P. A., Albertin, C. B., Tanaka, E., & Simakov, O. (2022). Emergence of novel cephalopod gene regulation and expression through large-scale genome reorganization. Nature Communications, 13(1), Article 1. https://doi.org/10.1038/s41467-022-29694-7

Shindyapina, A., V., Cho, Y., Kaya, A., Tyshkovskiy, A., Castro, J. P., Deik, A., Gordevicius, J., Poganik, J. R., Clish, C. B., Horvath, S., Peshkin, L., & Gladyshev, V. N. (2022). Rapamycin treatment during development extends life span and health span of male mice and Daphnia magna. Science Advances, 8(37). https://doi.org/10.1126/sciadv.abo5482

Sterner, Z. R., Jabrah, A., Shaidani, N.-I., Horb, M. E., Dockery, R., Paul, B., & Buchholz, D. R. (2023). Development and metamorphosis in frogs deficient in the thyroid hormone transporter MCT8. General and Comparative Endocrinology, 331, 114179. https://doi.org/10.1016/j.ygcen.2022.114179

Tran, M. T., & Oldenbourg, R. (2022). Point spread function of the polarized light field microscope. JOSA A, 39(6), 1095–1103. https://doi.org/10.1364/JOSAA.458034

Walker, S. E., Sabin, K. Z., Gearhart, M. D., Yamamoto, K., & Echeverri, K. (2022). Regulation of stem cell identity by miR-200a during spinal cord regeneration. Development, 149(3), dev200033. https://doi.org/10.1242/dev.200033

Walker, S., & Echeverri, K. (2022). Spinal cord regeneration—The origins of progenitor cells for functional rebuilding. Current Opinion in Genetics & Development, 75, 101917. https://doi.org/10.1016/j.gde.2022.101917

Zahn, N., James-Zorn, C., Ponferrada, V., Adams, D., Grzymkowski, J., Buchholz, D., Nascone-Yoder, N., Horb, M., Moody, S., Vize, P., & Zorn, A. (2022). Normal Table of Xenopus development: A new graphical resource. Development, 149(14). https://doi.org/10.1242/dev.200356