Ecosystems Publications

Recent Publications

Conte M. H., Pedrosa-Pàmies R., Weber J. C., Johnson R. J. (2025). The climatology of the deep particle flux in the oligotrophic western North Atlantic gyre, 1978–2022. Progress In Oceanography. 234:103433. doi: 10.1016/j.pocean.2025.103433

Valiela I., Chenoweth K., Day J. (2025). Meta-analysis of vegetation responses to experimental nitrogen enrichments done in salt marshes under different sea level rise regimes reveal interaction of N supply and sea level rise. The Science Of The Total Environment. 975:179198. doi: 10.1016/j.scitotenv.2025.179198

Sullivan H. L., Holtzer J., Deegan L. A., Bowen J. L. (2025). The Effect of Runnels on Salt Marsh Sediment Dynamics, Vegetation, and Nitrogen Cycling. Estuaries And Coasts. 48:73. doi: 10.1007/s12237-025-01511-6

Hopkinson C., Weston N. B., Vallino J. J., Garritt R. H., Forbrich I. (2025). Comparative Metabolism and Blue Carbon Sequestration of Two Wetland-Dominated Estuaries. Ocean-Land-Atmosphere Research. doi: 10.34133/olar.0091

Malhotra A., Megonigal P., Forbrich I., Määttä T., Morris K., Bittencourt Peixoto R., Wilson S., Zheng J., Bailey V. (2025). Revisiting the primary production control on wetland methane emission. doi: 10.5194/egusphere-egu25-12843

Peck E. K., Walker J. E., Ackerman K. V., Carr J., Correll M. D., Defne Z., Deegan L. A., Eaton M. J., Ganju N. K., Hartley M., Johnson C., Mercer J., Ruskin K. J., Woodruff J. D., Yellen B. (2025). Distribution and disturbances of ditches across salt marshes of the Northeast U.S. with implications for management and restoration. Journal Of Environmental Management. 376:124444. doi: 10.1016/j.jenvman.2025.124444

Peredo E. L., Thomas S., Cardon Z. G. (2025). Draft genome sequence of Mycobacterium sp. SA01 isolated from Sporobolus alterniflorus seedlings collected in Cape Cod (USA). Microbiology Resource Announcements. 14:e01025-e01024. doi: 10.1128/mra.01025-24

Guimond J. A., Grande E., Michael H. A., Pratt D., Herndon E., Noyce G. L., Ward N. D., Forbrich I., Regier P., Berens M. J., Arora B. (2025). The hidden influence of terrestrial groundwater on salt marsh function and resilience. Nature Water. 3:157-166. doi: 10.1038/s44221-024-00384-6

Stegen J., Burgin A. J., Busch M. H., Fisher J. B., Ladau J., Abrahamson J., Kinsman-Costello L., Li L., Chen X., Datry T., McDowell N., Tatariw C., Braswell A., Deines J. M., Guimond J. A., Regier P., Rod K., Bam E. K. P., Fluet-Chouinard E., Forbrich I., Jaeger K. L., O'Meara T., Scheibe T., Seybold E., Sweetman J. N., Zheng J., Allen D. C., Herndon E., Middleton B. A., Painter S., Roche K., Scamardo J., Vander Vorste R., Boye K., Wohl E., Zimmer M., Hondula K., Laan M., Marshall A., Patel K. F. (2025). Reviews and syntheses: Variable inundation across Earth's terrestrial ecosystems. Biogeosciences. 22:995-1034. doi: 10.5194/bg-22-995-2025

Pedrosa-Pamies R., Conte M. H., Weber J. C., Andersson A. J. (2025). Hurricane-Driven Transport of Bermuda Reef Carbonate Platform Sediments to the Deep Ocean. Journal Of Geophysical Research-Oceans. 130. doi: 10.1029/2023JC020500

Klionsky S. M., Neill C., Pulak A. M., Lawrence B. (2025). Hydrologic Restoration of Retired Cranberry Farms Leads to Species Rich Wetlands. Applied Vegetation Science. 28. doi: 10.1111/avsc.70024

Hinkle J. E., Chanton J. P., Moynihan M. A., Ruff S. E., Teske A. (2025). Complex bacterial diversity of Guaymas Basin hydrothermal sediments revealed by synthetic long-read sequencing (LoopSeq). Frontiers In Microbiology. 15. doi: 10.3389/fmicb.2024.1491488

Tang A. C. I., Bohrer G., Malhotra A., Missik J., Machado-Silva F., Forbrich I. (2025). Rising Water Levels and Vegetation Shifts Drive Substantial Reductions in Methane Emissions and Carbon Dioxide Uptake in a Great Lakes Coastal Freshwater Wetland. Global Change Biology. 31. doi: 10.1111/gcb.70053

V. Popin G., de Resende M. E. B., Locatelli J. L., Santos R. S., Siqueira-Neto M., Brando P. M., Neill C., Cerri C. E. P. (2025). Land-use change and deep-soil carbon distribution on the Brazilian Amazon-Cerrado agricultural frontier. Agriculture Ecosystems & Environment. 381. doi: 10.1016/j.agee.2024.109451

Gherca W., Forbrich I., Jacotot A., Knox S. H., Leahy P. G., Morrison R., Sachs T., Eichelmann E. (2025). Biometeorological feedbacks on peatlands: Raising the water table to reduce meteorologically-related stress on cattle. Agricultural And Forest Meteorology. 360. doi: 10.1016/j.agrformet.2024.110279

Jiang Q., Cao L., Han Y., Li S., Zhao R., Zhang X., Ruff S. E., Zhao Z., Peng J., Liao J., Zhu B., Wang M., Lin X., Dong X. (2025). Cold seeps are potential hotspots of deep-sea nitrogen loss driven by microorganisms across 21 phyla. Nature Communications. 16. doi: 10.1038/s41467-025-56774-1

Houghton R. A., Davidson E. A., Melillo J. M., Schlesinger W. H., Shaver G. R. (2025). Resolution of Respect: George M. Woodwell (1928–2024). Bulletin Of The Ecological Society Of America. 106. doi: 10.1002/bes2.2204

Jakuba R. W., Williams T., Neill C., Costa J. E., McHorney R., Scott L., Howes B. L., Ducklow H. W., Erickson M., Rasmussen M. (2025). Buzzards Bay Water Quality Data from the Buzzards Bay Coalition’s Baywatchers Program 2021-2023. public url: https://hdl.handle.net/1912/71195

Simon S. A., Soares A. R., Bornemann T. L. V., Lange A., Griesdorn L., Fuentes A., Dieckmann M., Krok B. A., Ruff S. E., Hügler M., Moraru C., Probst A. J. (2025). Inferring replication states of bacteria and viruses in enrichment cultures via long-read sequencing. Isme Communications. 5:ycaf041. doi: 10.1093/ismeco/ycaf041

Ayvazian S. G., Miller K., Grabbert S. C., Hanian A. J., Hanian S. R., Deegan L. A. (2024). Ribbed Mussel Response to Nutrient Enrichment in the Plum Island Estuary, Massachusetts, USA. Journal Of Shellfish Research. 43:311-321. doi: 10.2983/035.043.0302

Vallino J. J., Ahern O. M., Huber J. A. Deriving microbial food web structure by maximizing entropy production over variable timescales. doi: 10.1101/2025.04.30.651452

Elkassas S. M., Fortunato C. S., Grim S. L., Butterfield D. A., Holden J. F., Vallino J. J., Algar C. K., Allen L. Z., Larson B. T., Proskurowski G., Reddington E., Stewart L. C., Topçuoğlu B., Huber J. A. Metabolic and Population Profiles of Active Subseafloor Autotrophs in Young Oceanic Crust at Deep-Sea Hydrothermal Vents. doi: 10.1101/2025.04.25.650746