As of August 1, 2022

Bruce, H., & Patel, N. (2022). The Daphnia carapace and other novel structures evolved via the cryptic persistence of serial homologs. Current Biology, 21, 1-8.

Darras, H., De Souza Araujo, N., Baudry, L., Guiglielmoni, N., Lorite, P., Marbouty, M., Rodriguez, F.Arkhipova, I., Koszul, R., Flot, J.-F., & Aron, S. (2022). Chromosome-level genome assembly and annotation of two lineages of the ant Cataglyphis hispanica: Stepping stones towards genomic studies of hybridogenesis and thermal adaptation in desert ants. Peer Community Journal2, e40.

Kumar, A., Kerr, L., Shribak, M., Oldenbourg, R., & Patel, N. (2022). Reflecting on the Past and Building the Future of Imaging at MBL: Carrying Forward Shinya Inoué’s Legacy. Microscopy and Microanalysis28(S1), 1554–1556.

Oldenbourg, R. (2022). Elevating Polarized Light Microscopy to the Third Dimension. Microscopy and Microanalysis28(S1), 1550–1552.

Orvis, J., Albertin, C., Shrestha, P., Chen, S., Zheng, M., Rodriguez, C., Tallon, L., Mahurkar, A., Zimin, A., Kim, M., Liu, K., Kandel, E., Fraser, C., Sossin, W., & Abrams, T. (2022). The evolution of synaptic and cognitive capacity: Insights from the nervous system transcriptome of Aplysia. Proceedings of the National Academy of Sciences of the United States of America119(28), e2122301119.

Zahn, N., James-Zorn, C., Ponferrada, V., Adams, D., Grzymkowski, J., Buchholz, D., Nascone-Yoder, N., Horb, M., Moody, S., Vize, P., & Zorn, A. (2022). Normal Table of Xenopus development: A new graphical resource. Development149(14).

Moroishi, Y., Gui, J., Hoen, A., Morrison, H., Baker, E., Nadeau, K., Li, H., Li, Z., Madan, J., & Karagas, M. (2022). The relationship between the gut microbiome and the risk of respiratory infections among newborns. Communications Medicine2(1), 87.

Rogers, L., Van Wert, J., & Mensinger, A. (2022). Response of toadfish (Opsanus tau) utricular afferents to multimodal inputs. Journal of Neurophysiology.

Gorbsky, G. J., Daum, J. R., Sapkota, H., Summala, K., Yoshida, H., Georgescu, C., Wren, J. D., Peshkin, L., & Horb, M. E. (2022). Developing immortal cell lines from Xenopus embryos, four novel cell lines derived from Xenopus tropicalis. Open Biology12(7).

Pold, G., Kwiatkowski, B. L., Rastetter, E. B., & Sistla, S. A. (2022). Sporadic P limitation constrains microbial growth and facilitates SOM accumulation in the stoichiometrically coupled, acclimating microbe-plant-soil model. Soil Biology & Biochemistry165.

Schrieke, H., Maignien, L., Constancias, F., Trigodet, F., Chakloute, S., Rakotoarivony, I., Marie, A., L’Ambert, G., Makoundou, P., Pages, N., Eren, A. M., Weill, M., Sicard, M., & Reveillaud, J. (2022). The mosquito microbiome includes habitat-specific but rare symbionts. Computational and Structural Biotechnology Journal20, 410–420.

Thiruppathy, M., Fabian, P., Gillis, J. A., & Crump, J. G. (2022). Gill developmental program in the teleost mandibular arch. eLife11.

Tsakalakis, I., Follows, M. J., Dutkiewicz, S., Follett, C. L., & Vallino, J. J. (2022). Diel light cycles affect phytoplankton competition in the global ocean. Global Ecology and Biogeography.

Kim, D., Buresch, K., Hanlon, R., & Kampff, A. (2022). An experimental method for evoking and characterizing dynamic color patterning of cuttlefish during prey capture. Journal of Biological Methods9(2), e161.

Roguet, A., Newton, R., Eren, A., & McLellan, S. (2022). Guts of the Urban Ecosystem: Microbial Ecology of Sewer Infrastructure. MSystems, e00118–e00122.

Liguori, A. (2022). Limited evidence for local adaptation to salinity and temperature variability in San Juan Island populations of the copepod Tigriopus californicus (Baker). Journal of Experimental Marine Biology and Ecology554.

McCarthy, J.Kelly, S., VanHook, A., Marques-Souza, H., Serano, J., & Patel, N. (2022). Expression of Abdominal-B in the brine shrimp, Artemia franciscana, expands our evolutionary understanding of the crustacean abdomen. Developmental Biology.

Moroishi, Y., Gui, J., Nadeau, K. C., Morrison, H. G., Madan, J., & Karagas, M. R. (n.d.). A prospective study of the infant gut microbiome in relation to vaccine response. Pediatric Research.

Tran, M. T., & Oldenbourg, R. (2022). Point spread function of the polarized light field microscope. Journal of the Optical Society of America A-Optics Image Science and Vision39(6), 1095–1103.

Martin, P., Moynihan, M. A., Chen, S., Woo, O. Y., Zhou, Y., Nichols, R. S., Chang, K. Y. W., Tan, A. S. Y., Chen, Y.-H., Ren, H., & Chen, M. (2022). Monsoon-driven biogeochemical dynamics in an equatorial shelf sea: Time-series observations in the Singapore Strait. Estuarine Coastal and Shelf Science270.

Thomsen, E., Herbeck, L., Teichberg, M., Wang, D. R., Chen, S.-Q., & Jennerjahn, T. C. (2022). Species-specific phenotypic plasticity of two tropical seagrass species in response to in situ fertilisation under different trophic conditions. Estuarine, Coastal and Shelf Science270.

Chaouni, B., Idrissi Azami, A., Essayeh, S., Arrafiqui, E., Bailal, A., Raoui, S., Amzazi, S., Twaddle, A., El Hamouti, C., Boukhatem, N., Timinouni, M., El Otmani, F., Chahboune, R., Barrijal, S., El Homani, A., Nejjari, C., Zaid, E., Hamamouch, N., Bakkali, F., Amaral-Zettler, L., Ghazal, H. (2022). Moroccan Lagoon Microbiomes. Water14(11), 1715.

Pattanayak, R., Underwood, R., Crowley, M. R., Crossman, D. K., Morgan, J. R., & Yacoubian, T. A. (2022). Deletion in chromosome 6 spanning alpha-synuclein and multimerin1 loci in the Rab27a/b double knockout mouse. Scientific Reports12(1), 9837.

Vanni, C., Schechter, M. S., Acinas, S. G., Barberan, A., Buttigieg, P. L., Casamayor, E. O., Delmont, T. O., Duarte, C. M., Eren, A. M., Finn, R. D., Kottmann, R., Mitchell, A., Sanchez, P., Siren, K., Steinegger, M., Gloeckner, F. O., & Fernandez-Guerra, A. (2022). Unifying the known and unknown microbial coding sequence space. ELIFE11

Bachy, C., Wittmers, F., Muschiol, J., Hamilton, M., Henrissat, B., & Worden, A. Z. (2022). The land-sea connection: insights into the plant lineage from a green algal perspective. Annual Review Plant Biology73, 585–616.

Rastetter, E., Kwiatkowski, B., Kicklighter, D., Plotkin, A., Genet, H., Nippert, J., O’Keefe, K., Perakis, S., Porder, S., Roley, S., Ruess, R., Thompson, J., Wieder, W., Wilcox, K., & Yanai, R. (2022). N and P constrain C in ecosystems under climate change: role of nutrient redistribution, accumulation, and stoichiometry. Ecological Applications, e2684. 

Bachy, C., Sudek, L., Choi, C. J., Eckmann, C. A., Nöthig, E.-M., Metfies, K., & Worden, A. Z. (2022). Phytoplankton surveys in the Arctic Fram Strait demonstrate the tiny eukaryotic alga Micromonas and other picoprasinophytes contribute to deep sea export. Microorganisms10(5), 961. 

Klasek, S., Brock, M., Calder, W., Morrison, H., Weinig, C., & Maïgnien, L. (2022). Spatiotemporal heterogeneity and intragenus variability in rhizobacterial associations with Brassica rapa growth. MSystems, e00060–e00022. 

Petrosino, G., Ponte, G., Volpe, M., Zarrella, I., Ansaloni, F., Langella, C., Di Cristina, G., Finaurini, S., Russo, M., Basu, S., Musacchia, F., Ristoratore, F., Pavlinic, D., Benes, V., Ferrante, M., Albertin, C., Simakov, O., Gustincich, S., Fiorito, G., & Sanges, R. (2022). Identification of LINE retrotransposons and long non-coding RNAs expressed in the octopus brain. BMC Biology20(1) 116. 

Sanders‐DeMott, R., Eagle, M., Kroeger, K., Wang, F., Brooks, T., Suttles, J., Nick, S., Mann, A., & Tang, J. (2022). Impoundment increases methane emissions in Phragmites‐invaded coastal wetlands. Global Change Biology 

Walker, S. E., & Echeverri, K. (2022). Spinal cord regeneration—The origins of progenitor cells for functional rebuilding. Current Opinion in Genetics & Development75, 101917. 

Aymonnier, K., Ng, J., Fredenburgh, L. E., Zambrano-Vera, K., Muenzer, P., Gutch, S., Fukui, S., Desjardins, M., Subramaniam, M., Baron, R. M., Raby, B. A., Perrella, M. A., Lederer, J. A., & Wagner, D. D. (2022). Inflammasome activation in neutrophils of patients with severe COVID-19. Blood Advances6(7), 2001–2013.

Cardon, Z. G., Peredo, E. L., Enloe, C. M., Oakey, J. S., Wu, S.-Z., & Bezanilla, M. (2022). Slip slidin’ away: bristle-driven gliding by Tetradesmus deserticola (chlorophyta) in microfluidic chambers(1). Journal of Phycology

Kalia, N., Hauser, K., Burton, S., Hossainey, M., Zelle, M., Horb, M., & Grayfer, L. (2022). Endogenous retroviruses augment amphibian (Xenopus laevis) tadpole antiviral protection. Journal of Virology, e00634–e00622. 

Lebeaux, R., Madan, J., Nguyen, Q., Coker, M., Dade, E., Moroishi, Y., Palys, T., Ross, B., Pettigrew, M., Morrison, H., Karagas, M., & Hoen, A. (2022). Impact of antibiotics on off-target infant gut microbiota and resistance genes in cohort studies. Pediatric Research, 1–10.  CC

Sun, D., Bredeson, J., Bruce, H., & Patel, N. (2022). Identification and classification of cis-regulatory elements in the amphipod crustacean Parhyale hawaiensis. Development 

Winters, G., Teichberg, M., Reuter, H., Viana, I. G., & Willette, D. A. (2022). Editorial: Seagrasses under times of change. Frontiers in Plant Science13, 870478. 

Albertin, C. B., Medina-Ruiz, S., Mitros, T., Schmidbaur, H., Sanchez, G., Wang, Z. Y., Grimwood, J., Rosenthal, J. J. C., Ragsdale, C. W., Simakov, O., & Rokhsar, D. S. (2022). Genome and transcriptome mechanisms driving cephalopod evolution. Nature Communications13(1), 2427.

Richter, N., Russell, J., Amaral-Zettler, L., DeGroff, W., Raposeiro, P., Gonçalves, V., de Boer, E., Pla-Rabes, S., Hernández, A., Benavente, M., Ritter, C., Sáez, A., Bao, R., Trigo, R., Prego, R., & Giralt, S. (2022). Long-term hydroclimate variability in the sub-tropical North Atlantic and anthropogenic impacts on lake ecosystems: a case study from Flores Island, the Azores. Quaternary Science Reviews285, 107525.

DeGiorgis, J., Jang, M., & Bearer, E. (2022). The giant axon of the squid: s simple system for axonal transport studies. Axonal Transport 2431, 3–22.

Echeverri, K., Fei, J., & Tanaka, E. (2022). Chapter Twenty-Two The Axolotl’s journey to the modern molecular era. In Emerging Model Systems in Developmental Biology (Vol. 147, pp. 631–658). 

Loescher, H., Vargas, R., Mirtl, M., Morris, B., Pauw, J., Yu, X., Kutsch, W., Mabee, P., Tang, J., Ruddell, B., Pulsifer, P., Bäck, J., Zacharias, S., Grant, M., Feig, G., Zheng, L., Waldmann, C., & Genazzio, M. (2022). Building a global ecosystem research infrastructure to address global grand challenges for macrosystem ecology. Earth’s Future, 10, e2020EF001696.

Lyons, D., & Henry, J. (2022). Slipper snail tales: how Crepidula fornicata and Crepidula atrasolea became model molluscs. Emerging Model Systems in Developmental Biology, 147, 375–399. 

Schmidbaur, H., Kawaguchi, A., Clarence, T., Fu, X., Hoang, O. P., Zimmermann, B., Ritschard, E. A., Weissenbacher, A., Foster, J. S., Nyholm, S., Bates, P. A., Albertin, C. B., Tanaka, E., & Simakov, O. (2022). Emergence of novel cephalopod gene regulation and expression through large-scale genome reorganization. Nature Communications13(1), 2172.

Buresch, K. C., Sklar, K., Chen, J. Y., Madden, S. R., Mongil, A. S., Wise, G. V., Boal, J. G., & Hanlon, R. T. (2022). Contact chemoreception in multi-modal sensing of prey by Octopus. Journal of Comparative Physiology. A, Neuroethology, Sensory, Neural, and Behavioral Physiology  

Pomerantz, A., Sahlin, K., Vasiljevic, N., Seah, A., Lim, M., Humble, E., Kennedy, S., Krehenwinkel, H., Winter, S., Ogden, R., & Prost, S. (2022). Rapid in situ identification of biological specimens via DNA amplicon sequencing using miniaturized laboratory equipment. Nature Protocols  

van Daalen, S. F., Hernandez, C. M., Caswell, H., Neubert, M. G., & Gribble, K. E. (2022). The contributions of maternal age heterogeneity to variance in lifetime reproductive output. American Naturalist,199(5).  

Katz, H. R., Arcese, A. A., Bloom, O., & Morgan, J. R. (2022). Activating transcription factor 3 (ATF3) is a highly conserved pro-regenerative transcription factor in the vertebrate nervous system. Frontiers in Cell and Developmental Biology10, 824036. 

Stolp, Z. D., Kulkarni, M., Liu, Y., Zhu, C., Jalisi, A., Lin, S., Casadevall, A., Cunningham, K. W., Pineda, F. J., Teng, X., & Hardwick, J. M. (2022). Yeast cell death pathway requiring AP-3 vesicle trafficking leads to vacuole/lysosome membrane permeabilization. Cell Reports39(2), 110647. 

Stunz, E., Fetcher, N., Lavretsky, P., Mohl, J., Tang, J., & Moody, M. (2022). Landscape genomics provides evidence of ecotypic adaptation and a barrier to gene flow at treeline for the arctic foundation species Eriophorum vaginatum. Frontiers in Plant Science13, 860439. 

Moran, M., Kujawinski, E., Schroer, W., Amin, S., Bates, N., Bertrand, E., Braakman, R., Brown, C., Covert, M., Doney, S., Dyhrman, S., Edison, A., Eren, A. M., Levine, N., Li, L., Ross, A., Saito, M., Santoro, A., Segrè, D., Shade, A., Sullivan, M. B., & Vardi, A. (2022). Microbial metabolites in the marine carbon cycle. Nature Microbiology7(4), 508–523.;

Paris, M., Wolff, C., Patel, N., & Averof, M. (2022). The crustacean model Parhyale hawaiensis. Current Topics in Developmental Biology147, 199–230.