Recent Publications

2022

Crognale S, Venturi S, Tassi F, Rossetti S, Cabassi J, Capecchiacci F, Bicocchi G, Vaselli O, Morrison HG, Sogin ML, Fazi S. Geochemical and microbiological profiles in hydrothermal extreme acidic environments (Pisciarelli Spring, Campi Flegrei, Italy). FEMS Microbiol Ecol. 2022 Sep 19;98(10):fiac088. doi: 10.1093/femsec/fiac088. PMID: 35883234.

Klasek SA, Brock MT, Calder WJ, Morrison HG, Weinig C, Maïgnien L. Spatiotemporal Heterogeneity and Intragenus Variability in Rhizobacterial Associations with Brassica rapa Growth. mSystems. 2022 Jun 28;7(3):e0006022. doi: 10.1128/msystems.00060-22. Epub 2022 May 16. PMID: 35575562; PMCID: PMC9239066.

Lebeaux RM, Madan JC, Nguyen QP, Coker MO, Dade EF, Moroishi Y, Palys TJ, Ross BD, Pettigrew MM, Morrison HG, Karagas MR, Hoen AG. Impact of antibiotics on off-target infant gut microbiota and resistance genes in cohort studies. Pediatr Res. 2022 May 14. doi: 10.1038/s41390-022-02104-w. Epub ahead of print. PMID: 35568730.

Morillo-Lopez V, Sjaarda A, Islam I, Borisy GG, Mark Welch JL. Corncob structures in dental plaque reveal microhabitat taxon specificity. Microbiome. 2022 Sep 5;10(1):145. doi: 10.1186/s40168-022-01323-x. PMID: 36064650; PMCID: PMC9446765.

Moroishi Y, Gui J, Hoen AG, Morrison HG, Baker ER, Nadeau KC, Li H, Li Z, Madan JC, Karagas MR. The relationship between the gut microbiome and the risk of respiratory infections among newborns. Commun Med (Lond). 2022 Jul 14;2:87. doi: 10.1038/s43856-022-00152-1. PMID: 35847562; PMCID: PMC9283516.

Moroishi Y, Gui J, Nadeau KC, Morrison HG, Madan J, Karagas MR. A prospective study of the infant gut microbiome in relation to vaccine response. Pediatr Res. 2022 Jun 18. doi: 10.1038/s41390-022-02154-0. Epub ahead of print. PMID: 35717483.

Perera D, McLean A, Morillo-López V, Cloutier-Leblanc K, Almeida E, Cabana K, Mark Welch JL, Ramsey M. Mechanisms underlying interactions between two abundant oral commensal bacteria. ISME J. 2022 Apr;16(4):948-957. doi: 10.1038/s41396-021-01141-3. Epub 2021 Nov 3. PMID: 34732850; PMCID: PMC8940909.

Raposeiro PM, Hernández A, Pla-Rabes S, Gonçalves V, Bao R, Sáez A, Shanahan T, Benavente M, de Boer EJ, Richter N, Gordon V, Marques H, Sousa PM, Souto M, Matias MG, Aguiar N, Pereira C, Ritter C, Rubio MJ, Salcedo M, Vázquez-Loureiro D, Margalef O, Amaral-Zettler LA, Costa AC, Huang Y, van Leeuwen JFN, Masqué P, Prego R, Ruiz-Fernández AC, Sanchez-Cabeza JA, Trigo R, Giralt S. Reply to Elias et al.: Multiproxy evidence of widespread landscape disturbance in multiple Azorean lakes before the Portuguese arrival. Proc Natl Acad Sci U S A. 2022 Jan 25;119(4):e2120107119. doi: 10.1073/pnas.2120107119. PMID: 35046052; PMCID: PMC8794883.

Schrieke H, Maignien L, Constancias F, Trigodet F, Chakloute S, Rakotoarivony I, Marie A, L'Ambert G, Makoundou P, Pages N, Murat Eren A, Weill M, Sicard M, Reveillaud J. The mosquito microbiome includes habitat-specific but rare symbionts. Comput Struct Biotechnol J. 2021 Dec 23;20:410-420. doi: 10.1016/j.csbj.2021.12.019. PMID: 35140881; PMCID: PMC8803474.

Duque-Correa MA, Goulding D, Rodgers FH, Gillis JA, Cormie C, Rawlinson KA, Bancroft AJ, Bennett HM, Lotkowska ME, Reid AJ, Speak AO, Scott P, Redshaw N, Tolley C, McCarthy C, Brandt C, Sharpe C, Ridley C, Moya JG, Carneiro CM, Starborg T, Hayes KS, Holroyd N, Sanders M, Thornton DJ, Grencis RK, Berriman M. Defining the early stages of intestinal colonisation by whipworms. Nat Commun. 2022 Apr 1;13(1):1725. doi: 10.1038/s41467-022-29334-0. PMID: 35365634; PMCID: PMC8976045.

Cipolloni OA, Gigault J, Dassié ÉP, Baudrimont M, Gourves PY, Amaral-Zettler L, Pascal PY. Metals and metalloids concentrations in three genotypes of pelagic Sargassum from the Atlantic Ocean Basin-scale. Mar Pollut Bull. 2022 Mar 28;178:113564. doi: 10.1016/j.marpolbul.2022.113564. Epub ahead of print. PMID: 35358892.

Ramírez-Puebla ST, Weigel BL, Jack L, Schlundt C, Pfister CA, Mark Welch JL. Spatial organization of the kelp microbiome at micron scales. Microbiome. 2022 Mar 24;10(1):52. doi: 10.1186/s40168-022-01235-w. PMID: 35331334; PMCID: PMC8944128.

van Daalen SF, Hernández CM, Caswell H, Neubert MG, and Gribble KE. The Contributions of Maternal Age Heterogeneity to Variance in Lifetime Reproductive Output. The American Naturalist. Published online March 28, 2022 doi/10.1086/718716. Epub ahead of print.

Rodriguez F, Yushenova IA, DiCorpo D, Arkhipova IR. Bacterial N4-methylcytosine as an epigenetic mark in eukaryotic DNA. Nat Commun. 2022 Feb 28;13(1):1072. doi: 10.1038/s41467-022-28471-w. PMID: 35228526.

Gillis JA, Bennett S, Criswell KE, Rees J, Sleight VA, Hirschberger C, Calzarette D, Kerr S, Dasen J. Big insight from the little skate: Leucoraja erinacea as a developmental model system. Curr Top Dev Biol. 2022;147:595-630. doi: 10.1016/bs.ctdb.2021.12.016. Epub 2022 Feb 28. PMID: 35337464.

Paul BG, Eren AM. Eco-evolutionary significance of domesticated retroelements in microbial genomes. Mob DNA. 2022 Feb 23;13(1):6. doi: 10.1186/s13100-022-00262-6. PMID: 35197094; PMCID: PMC8867640.

Bronikowski AM, Meisel RP, Biga PR, Walters JR, Mank JE, Larschan E, Wilkinson GS, Valenzuela N, Conard AM, de Magalhães JP, Duan JE, Elias AE, Gamble T, Graze RM, Gribble KE, Kreiling JA, Riddle NC. Sex-specific aging in animals: Perspective and future directions. Aging Cell. 2022 Feb;21(2):e13542. doi: 10.1111/acel.13542. Epub 2022 Jan 23. PMID: 35072344; PMCID: PMC8844111.

Trigodet F, Lolans K, Fogarty E, Shaiber A, Morrison HG, Barreiro L, Jabri B, Eren AM. High molecular weight DNA extraction strategies for long-read sequencing of complex metagenomes. Mol Ecol Resour. 2022 Jan 23. doi: 10.1111/1755-0998.13588. Epub ahead of print. PMID: 35068060.

Zhao S, Zettler ER, Bos RP, Lin P, Amaral-Zettler LA, Mincer TJ. Large quantities of small microplastics permeate the surface ocean to abyssal depths in the South Atlantic Gyre. Glob Chang Biol. 2022 Jan 19. doi: 10.1111/gcb.16089. Epub ahead of print. PMID: 35048454.